Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00700 ATGGAATCATCATCATCATCAAACTCAGCTACAATAATAAACCAATCCTTCGACGAATTCTACTCACACCACGCCCGCGAATCGCTCGACGAATTGTCTGACTACTTTACAATCACCGACCCTTCCATTTCAGGCCATCCTATTGTTTTCGCCAGCCACGCGTTTCTTAAGATGACTGGGTTCACGCGCGACGAAGTTGTTGGGAGAAGCGGTGGCATGTTTCAAGGTCCGGCGACTTGTCGTAGGTCGGTGATGGAAATTCGTGAAGCTGTTAGGGAAGAGAGAGAGTGTGATGTCGTTTTGGTTAATTATCGTAAAGACGGCACGCCGTTTTGGGTTTTGATTAGTGTTTGTCCTGTTTTTAGTAAACGTGGTGGTGCTGTTGTTCACTTTGTTGCTGTTCAGGTTCCGTTGCATAGGAAAAGAACAAGGATTTGTTATAGTGATGGGTTTTCTCATCAGGTTCATCATGATTTTGTGTTTCGTTGTTGTCGGAAAGAAGTTTGTGCTGATTCGTTGGCTGAACTTGGTCGTGTTTCTTCTTCCGGGAGTCAAGTGTTGGAACATGATGTCACtgAATTGGAGAGTGAAGAGCCACGTGAGGCAAGTGATGTTGAGAGGAGAAGTGCTGTGACTGCCATGGACAACATCTTTTCTGTGCTAACCCACTATAGCGAGTTGACTGGAAGATTGGTGTCTAGAAAGAGATGCGGTATTCCTGACGTGGGTCTTCTTAGCTCTTCCTTGATTATTTCTCTTGGTAGAATCAAACAAAGCTTTGTATTAACTAATCCACATTTGCCAGATATGCCTATTGTTTATGCCAGTGATGCCTTCACGAAATTGACAGGTTATGCGAGAAACGAGGTATTGGGCAGCAACTGTAGATTTTTAGGAGGAAGAAATACTGATCACTCGGCTCTACATCTGATAAGGGAAAGCATCAAAAATGAACAACCATGCACAGAAGGATAA 975 0.4379 MESSSSSNSATIINQSFDEFYSHHARESLDELSDYFTITDPSISGHPIVFASHAFLKMTGFTRDEVVGRSGGMFQGPATCRRSVMEIREAVREERECDVVLVNYRKDGTPFWVLISVCPVFSKRGGAVVHFVAVQVPLHRKRTRICYSDGFSHQVHHDFVFRCCRKEVCADSLAELGRVSSSGSQVLEHDVTELESEEPREASDVERRSAVTAMDNIFSVLTHYSELTGRLVSRKRCGIPDVGLLSSSLIISLGRIKQSFVLTNPHLPDMPIVYASDAFTKLTGYARNEVLGSNCRFLGGRNTDHSALHLIRESIKNEQPCTEG 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00700 324 ProSiteProfiles PAS repeat profile. 21 70 IPR000014 -
Car02g00700 324 PANTHER PROTEIN TWIN LOV 1-LIKE 10 322 - -
Car02g00700 324 PANTHER PROTEIN TWIN LOV 1 10 322 - -
Car02g00700 324 SUPERFAMILY PYP-like sensor domain (PAS domain) 33 134 IPR035965 -
Car02g00700 324 SMART pac_2 98 141 IPR001610 -
Car02g00700 324 Gene3D PAS domain 259 324 - -
Car02g00700 324 Gene3D PAS domain 35 168 - -
Car02g00700 324 ProSiteProfiles PAS repeat profile. 272 294 IPR000014 -
Car02g00700 324 CDD PAS 48 134 IPR000014 -
Car02g00700 324 Pfam PAS domain 46 135 IPR000014 -
Car02g00700 324 Pfam PAS domain 259 311 IPR000014 -
Car02g00700 324 TIGRFAM sensory_box: PAS domain S-box protein 48 128 IPR000014 -
Car02g00700 324 SMART pas_2 23 92 IPR000014 -
Car02g00700 324 SMART pas_2 247 320 IPR000014 -
Car02g00700 324 SUPERFAMILY PYP-like sensor domain (PAS domain) 262 321 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00700 Car-Chr2 9291301 9297128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00700 22 322 AGC Kinase Gene Family AT5G58140 29.377 4.15e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00700 - - gmx:100785562 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00700 02 9291301 9297128 Car02g00700 02 9291301 9297128 ECH