Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00690 ATGGAAAAAAATGTGGGCTACACAACTGCAATTGTCTATGACAATGAAGATGGTGGGGTCATGGTTGCAATGGCAGGAAATTCTGCTGGTATAAGAATACATGTTGTATTTGTATCAAAAGCTTCGGGTTTGGCTCCAAAAGGATCACAATTTGATGCTAATCATTATGACACTAAGATGAATGAACTTCTTGCCAGTGATGGGCAAGAATTCTTTGCCACATATGATGAAGTCCATGATAGCTTTGGTCTGGATGTGACTCAACAGGCTCAGTCAGGAACTGGGAAGACAACAACATTTTGTTATGGAATTTTACAGCAGCTCGATTGCGGATTAGTTCAGTGTCAGATTGAGAAGGTTATGCGAGCTCTTGACGATTTCCTTGGTGTTAAGGTTCATGCTTGTGTTGGTGGGACAAGTGTTCGTGAGGATCAACGCATTCTCCCTGCTGCTTGTTTGTTATGA 465 0.4172 MEKNVGYTTAIVYDNEDGGVMVAMAGNSAGIRIHVVFVSKASGLAPKGSQFDANHYDTKMNELLASDGQEFFATYDEVHDSFGLDVTQQAQSGTGKTTTFCYGILQQLDCGLVQCQIEKVMRALDDFLGVKVHACVGGTSVREDQRILPAACLL 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00690 154 Gene3D - 72 153 IPR027417 -
Car02g00690 154 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 84 151 - -
Car02g00690 154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 148 IPR027417 -
Car02g00690 154 PANTHER - 45 82 - -
Car02g00690 154 PANTHER - 84 151 - -
Car02g00690 154 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 45 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00690 Car-Chr2 8980536 8981102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00690 42 150 Eukaryotic Initiation Factors Gene Family AT3G13920 52.229 4.78e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00690 K03257 - sind:105163354 164.851