Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00678 ATGTCTCCACAACAACCCAAACCATTAACCATTCCCTTTCTCTCCTTCCTCTCCTTCCTCCTACTCCTTCTCCTCTCTCCcacacccacacacacacacacacacacacacTCATGCTCTCCCAACAACAAAACAAAACACCCTTGCCCTCCCTTCCCCAACTCCACCCCACCATTCCCATTCTCCACTTCACCAGGCTGTGGCCACCCTTCATTCCAACTTAACTGCTCAACTCCTCACTCTCTCATCACAATCAACAACCTCTCTTTCTCCATTCTCACTTTCAAACCAAACTCTTCCTCATTCCTCATCTCCCCTTACACCCCCATTTCTTCACATTCACACCCCCTCAACAACACTTGCCCATATTCAACTTCTTCAATCCCTAGCACCCCAATCAACCTCTCAAATTCCCCTTTTACCCTCTCAGATGAATCATGCTCGCGTCTCTCTTTTCTCCAATCTTGTTCCCCTCCAACACTTCCTAATTGTAGTAGCTGCCATTATCAATGCAAACTCATCAAAAACCCTTCCGAAATTATAACCGATTGTAGATCTTTTCACCACTCTGTTTCTGAATCTGAACCTAGTTGTCAAAGCGATGTTCTTGGTTACCTCAACGAAATACTCACATTAGGAATCGAAGTTCAATGGGAACAAGCATTAACACAAGACTCTTATTTCACAAATTGCAGTGATTGTATCAACAACAATGGCTTCTGCGGTTTCAATTCATCAGACCCGAACAAACACTTCATCTGTTTCCATGCCGAATCAACTTTTTCACCACAGTGGATTCGCAAAGTGAAACCTAACAAAATCACGGTTTTCGCAATCGTTATCGCGTCCACTTCGTTACTTCTTTTTATTTCAGTAACAGTTTCCATTCTCCGATCGAGAAGCTTAAACTCTCCGTCACCGGCGGAGGAAGATCCAACCACCGTCTTCCTCCACAACCACCGCTCCGCGAGTCTTCTCCCTCCAGTTTTCACCTACGACGAATTGAACACCTCCACCAACAACTTTGATCCGAAGCGGAAAATTGGCGACGGCGGATTCGGAACCGTTTACCTCGGAAACCTCCGTGACGGAAAAATCGCCGCCGTGAAACACCTCCACCGTCAAAATCACACCGCAGCTTTCTCAACAAAATCGTTCTGCAACGAGATTCTCATTCTCTCTTCGATTAATCATCCAAATCTCGTTAAACTTCACGGTTACTGTAGCGATCCGAGAGGTTTAATTCTCGTTTACGATTACGTTCCTAACGGAACCCTAGCGGAACACCTTCACGGTTCAAAGAGTAAACGGAAAGGTTACTGGCTGACGTGGCAAACAAGGCTTGAAATTGCAATACAAACGGCGTTAGCGATGGAGTATCTTCATTTCTCAGTTGTGCCTCCCATAGTTCACAGAGATATAACGTCGTCAAATATCTTCGTCGAAAAAGATATGAGGATTAAAGTTGGTGATTTCGGGTTATCGAGGTTGTTAGTTTTTCAAGAAACAACTTCGTCCAACGGTTACGTTTGTACCGGTCCTCAAGGTACACCAGGGTATTTAGATCCTGATTATCACCGGTCGTTCCGGTTAACCGAGAAGAGTGACGTGTACAGTTTTGGTGTTGTTTTGCTTGAACTAATTTCGGGACTTAAAGCGGTGGATTATTGTAGAGATAAACGTGAGATGGCACTTGCTGATATGGTTGTTTCGAGGATTCATACGGGTCAATTGAATCAAGTACTTGACCCGGTTCTTGATTTGGGTAACGACGGTGAAGCGCTTGACGCCGTGGCTGCGGTGGCGGAGTTGGCTTTTCGGTGTGTTGCGGCGGATAAAGATGACAGACCCGATTCGAGGGAGGTTGTTGGGGAGTTAAAACGGGTTCGGTTACGGTCGTCAGTGAATGGTGACGTGGCAAAGGAGTGA 1929 0.4495 MSPQQPKPLTIPFLSFLSFLLLLLLSPTPTHTHTHTHSCSPNNKTKHPCPPFPNSTPPFPFSTSPGCGHPSFQLNCSTPHSLITINNLSFSILTFKPNSSSFLISPYTPISSHSHPLNNTCPYSTSSIPSTPINLSNSPFTLSDESCSRLSFLQSCSPPTLPNCSSCHYQCKLIKNPSEIITDCRSFHHSVSESEPSCQSDVLGYLNEILTLGIEVQWEQALTQDSYFTNCSDCINNNGFCGFNSSDPNKHFICFHAESTFSPQWIRKVKPNKITVFAIVIASTSLLLFISVTVSILRSRSLNSPSPAEEDPTTVFLHNHRSASLLPPVFTYDELNTSTNNFDPKRKIGDGGFGTVYLGNLRDGKIAAVKHLHRQNHTAAFSTKSFCNEILILSSINHPNLVKLHGYCSDPRGLILVYDYVPNGTLAEHLHGSKSKRKGYWLTWQTRLEIAIQTALAMEYLHFSVVPPIVHRDITSSNIFVEKDMRIKVGDFGLSRLLVFQETTSSNGYVCTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDYCRDKREMALADMVVSRIHTGQLNQVLDPVLDLGNDGEALDAVAAVAELAFRCVAADKDDRPDSREVVGELKRVRLRSSVNGDVAKE 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00678 642 CDD STKc_IRAK 348 628 - -
Car02g00678 642 ProSiteProfiles Protein kinase domain profile. 342 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00678 642 Pfam Protein tyrosine and serine/threonine kinase 345 625 IPR001245 GO:0004672|GO:0006468
Car02g00678 642 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Car02g00678 642 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 39 634 - -
Car02g00678 642 ProSitePatterns Tyrosine protein kinases specific active-site signature. 469 481 IPR008266 GO:0004672|GO:0006468
Car02g00678 642 Gene3D Transferase(Phosphotransferase) domain 1 421 639 - -
Car02g00678 642 Gene3D Phosphorylase Kinase; domain 1 318 420 - -
Car02g00678 642 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 39 634 IPR045274 GO:0007166
Car02g00678 642 SUPERFAMILY Protein kinase-like (PK-like) 323 626 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00678 Car-Chr2 8751275 8753831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00678 49 641 Receptor kinase-like Gene Family AT1G69910 61.175 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Car02g00678 PK_Tyr_Ser-Thr 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00678 - - cam:101489033 1219.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00678 02 8751275 8753831 Car02g00678 02 8751275 8753831 ECH