Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00676 ATGCTCCCCTTTTTTGTTGTTGGTAAAAATCCATTTGTAGCAAGAGTACAAATTGCTCTTAACATCAAAGGTTTGGATTATGAGAACAATATTGAAGAAACCTTAAATCCCAAAAGTGACTTGCTTCTTCAATCCAACCCCGTTTACAAGAAAATCCCAGTTTTAATTCATGGAGAAAAACCTATTTGTGAATCTGGAATCATAGTTGAATATATTGATGAAGTTTGGAAAAATAATGGTACTCCCTCTATCCTTCCTTCAAATTCTTATGATCGAGCCAATGCTCGATTTTGGGTTGCATACATCGATGACAAGTGGTATAATTCCATGCGAAGTGGTTTAACTGCACAAGATGATGAGTCAAAGAAGCAAATGGAAGAAGTGCTTGTGAGGATGGAAGAAGTGCTTAACAATTCCAATGAAGGAAAAGAGTTTTTTGGAGGAGATAAGATTGGATTTATTGACATTGCTTTTGGGTGCTATTTGAGTTGGTTTAAGGTCACAGAGATAATTATGGGAATTAATGTGCTTGATGAAACTAAGACTCCTGCATTGGCAAAATGGACTGAAGCTTTTGCTGCTCATCCTGCTGTGAAGGGAATTCTACCAGAAACTGATAACCTTTTGGTGTTTGCTAAAGGTTTTCTTCAAAATTTGGTTGCTGCTACTCCTAAGTAA 678 0.3658 MLPFFVVGKNPFVARVQIALNIKGLDYENNIEETLNPKSDLLLQSNPVYKKIPVLIHGEKPICESGIIVEYIDEVWKNNGTPSILPSNSYDRANARFWVAYIDDKWYNSMRSGLTAQDDESKKQMEEVLVRMEEVLNNSNEGKEFFGGDKIGFIDIAFGCYLSWFKVTEIIMGINVLDETKTPALAKWTEAFAAHPAVKGILPETDNLLVFAKGFLQNLVAATPK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00676 225 SUPERFAMILY Thioredoxin-like 9 107 IPR036249 -
Car02g00676 225 CDD GST_N_Tau 11 76 - -
Car02g00676 225 Gene3D - 85 225 - -
Car02g00676 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 215 IPR010987 -
Car02g00676 225 Pfam Glutathione S-transferase, N-terminal domain 9 74 IPR004045 -
Car02g00676 225 SUPERFAMILY GST C-terminal domain-like 74 217 IPR036282 -
Car02g00676 225 Pfam Glutathione S-transferase, C-terminal domain 113 196 IPR004046 -
Car02g00676 225 SFLD Glutathione Transferase (cytosolic) 11 219 IPR040079 -
Car02g00676 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Car02g00676 225 SFLD Main.3: Omega- and Tau-like 11 219 IPR045073 -
Car02g00676 225 CDD GST_C_Tau 90 215 IPR045074 GO:0004364|GO:0006749
Car02g00676 225 Gene3D Glutaredoxin 3 84 - -
Car02g00676 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 213 IPR045073 -
Car02g00676 225 PANTHER GLUTATHIONE S-TRANSFERASE U17 9 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00676 Car-Chr2 8729393 8731695 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00676 12 216 Glutathione S-transferase Gene Family AT1G10360 54.545 1.72e-77 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00676 K00799 - gmx:547576 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00676 02 8729393 8731695 Car02g00676 02 8729393 8731695 ECH
Car02g00676 02 8729393 8731695 Car07g02058 07 24950446 24953394 PCT