Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00663 ATGTCTCAGTCCCGAACGTGCTCACAGTGCGGCAACAATGGCCACAACTCTCGAACTTGCAACAACAAAGAGAAAATAATCAAGATTTTTGGCGTTCCAGTCATCAGAGCAAACAACGATAACAACTCTTTTAGGAGAAGCGCCAGTCTGAACAACCTGACCCAATACGAACAATTGCCACCTCAACAATCCAACGTCGTTGATGTCGGTTACATCTCTGACAATGTAGTCCATGCATCTGGCCGTGCCCCCGAACGCAAACGAGCTGTTGCTTGGACGGAGGAAGAACataagttatttctgttgggattacaaaagcttggtaaaggtgattggcgaggaatttcaagaaactttgttaaaactcgcacaccaactcaggtcgcaagtcatgctcagaagtatttcctccgccGTCATAACCAAAACCGCCGCCGCCGGAGATCTAGCCTCTTTGACATCACCACCGATACGGTGATGGAATCTTTGACTATAATGGAAGGAGAGCAATTTCAGCAAGAAATTGCGGTGCCGCTCCCGCCGCCTACCCCTAGCGTATATCCAGCGTCACATTACGGCGGCATCTCCGGGACAGCTTTTCCGATAGGTCTGGCTCCGGTAGCATTGCCGGTGGCGAGTGGTGAAAGATTGATCACCAAGCCAATTAGGCCAACGCCAATGCTGCCTCCTTCTTCTAAGATGGCTAATTTGAACTTAAAAGAAAAAGTTTCTTCTTCCATTCAACCTCTACCCTTGTCATTGAATTTGCAATATTCCTCACTGCCTTCTAAGGATAGTTCACCGGAAAGTAGTAGCCGTtcgtcgccgtcttcgtcgtcgtcgAATTTTCAAGCTATGTCTTCGGGGAAGTATAGTGGTGGGGGTGGAGATAGTAATATTATTAGTGTTGCCTAA 915 0.3989 MSQSRTCSQCGNNGHNSRTCNNKEKIIKIFGVPVIRANNDNNSFRRSASLNNLTQYEQLPPQQSNVVDVGYISDNVVHASGRAPERKRAVAWTEEEHKLFLLGLQKLGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESLTIMEGEQFQQEIAVPLPPPTPSVYPASHYGGISGTAFPIGLAPVALPVASGERLITKPIRPTPMLPPSSKMANLNLKEKVSSSIQPLPLSLNLQYSSLPSKDSSPESSSRSSPSSSSSNFQAMSSGKYSGGGGDSNIISVA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00663 304 Gene3D - 90 141 - -
Car02g00663 304 MobiDBLite consensus disorder prediction 258 304 - -
Car02g00663 304 CDD SANT 91 136 IPR001005 -
Car02g00663 304 SUPERFAMILY Homeodomain-like 86 139 IPR009057 -
Car02g00663 304 ProSiteProfiles Zinc finger CCHC-type profile. 7 20 IPR001878 GO:0003676|GO:0008270
Car02g00663 304 SMART sant 88 138 IPR001005 -
Car02g00663 304 Pfam Myb-like DNA-binding domain 91 136 IPR001005 -
Car02g00663 304 ProSiteProfiles Myb-like domain profile. 84 136 IPR001005 -
Car02g00663 304 PANTHER TRANSCRIPTION FACTOR MYB1R1-LIKE 32 292 - -
Car02g00663 304 MobiDBLite consensus disorder prediction 258 295 - -
Car02g00663 304 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 87 138 IPR006447 GO:0003677
Car02g00663 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 140 IPR017930 -
Car02g00663 304 ProSiteProfiles SANT domain profile. 87 140 IPR017884 -
Car02g00663 304 PANTHER TRANSCRIPTION FACTOR KUA1 32 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00663 Car-Chr2 8544391 8551815 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car02g00663 Myb_DNA-binding 7.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00663 - - mtr:MTR_5g037080 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00663 02 8544391 8551815 Car02g00663 02 8544391 8551815 ECH
Car02g00663 02 8544391 8551815 Car02g00663 02 8544391 8551815 PCT