Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00656 ATGATGAATGGTGGTGATCAAAATTATATAGTAATTGATAAAGTGGCCTTTGAATTGGCCATGGAAATAAAGAGTAGACTTAAAGATGAGAGGGAGAAGTTTGAAGAACTTGTGAATGTTTTCATTGATTGGAAGGCAAAAAGAGTTGACACTACTTATGTTGATGAAAAAGTGTACGAAATACTTGAAGGTCACAACGATTTGATAATGAGATTCAACAACTATATGCACAAAGGAAATGAAATCAAGTATTTGATGGAGGAAGAACAACCTCCCCCAAAGAAGCGTGTTACAATGGAAGATGCTATAAATTTTTTGAACAAGATAAAGGCTCAATGCCAAGGTGTTGATGATCGAGTTTACCAATCCTTTTGTCACATAATGAAAATGTACTACAAGAAAAATATCTCTTACAAAAGGGTCATCTATGAGGTTGTTGGAATTTTCAAAGATTATCCTGAGCTTCTTGAAGGGTTTAAACATTTTCTTCCTAAACATGTCACTATATGA 510 0.3373 MMNGGDQNYIVIDKVAFELAMEIKSRLKDEREKFEELVNVFIDWKAKRVDTTYVDEKVYEILEGHNDLIMRFNNYMHKGNEIKYLMEEEQPPPKKRVTMEDAINFLNKIKAQCQGVDDRVYQSFCHIMKMYYKKNISYKRVIYEVVGIFKDYPELLEGFKHFLPKHVTI 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00656 169 ProSiteProfiles PAH domain profile. 95 166 IPR003822 GO:0006355
Car02g00656 169 PANTHER HISTONE DEACETYLASE INTERACTING DOMAIN, SIN3-RELATED 21 165 - -
Car02g00656 169 SUPERFAMILY PAH2 domain 91 165 IPR036600 GO:0006355
Car02g00656 169 SUPERFAMILY PAH2 domain 22 77 IPR036600 GO:0006355
Car02g00656 169 Gene3D Paired amphipathic helix 16 76 IPR036600 GO:0006355
Car02g00656 169 Pfam Paired amphipathic helix repeat 120 163 IPR003822 GO:0006355
Car02g00656 169 Gene3D Paired amphipathic helix 94 166 IPR036600 GO:0006355
Car02g00656 169 PANTHER SIN3B-RELATED 21 165 IPR039774 GO:0003714
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00656 Car-Chr2 8419990 8421417 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00656 23 111 WRKY Transcription Factor Family AT4G12020 30.337 3.53e-08 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car02g00656 PAH 2.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00656 K11644 - cit:102612187 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00656 02 8419990 8421417 Car02g00656 02 8419990 8421417 ECH