Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00655 ATGGACAAAGCCAATGTTATCAAACGCCGAGTTAACAGTCCTAAAGAGGAACTTGCTTTGAATGATTGTGAGCAACTAATGGACTTGTCAATCGATAGAGTTTGGAACTCAGTATTGACACTAACTAACAATAACATTGATTCAAAGCAAAATGCACACACATGGCTAAGTACTGTGTTTACTAACCATGTAACTTGCTTGGATGGATTAGAAGGTTCATCTTTGGTTGTTATGGAAAGTGATCTTCATGACTTGATATCAAGAGCTAGAAGCTATCTCGCCGTGCTTGTCGCGGTTTTTCCTTCAAAAGATAGTGATGGATTCATTGAGGAGAAGTTGAATGGAGACTTTCCTTCTTGGGTAACAAGTAAGGATATGAAGCTTTTGGAATCTTCAATTGGAGACATAAAGGCAAATGTTGTGGTGGCTAAAGATGGAAGTGGCAAATTTAAGACTGTGGCTGAAGCTGTTGCATCTACACCAGATAATGGTAATACAAGCTGTTGTTGGGGATGGTTTATAGCTCAGGACATTGGGTTCAAAGATACAGTAGGCCTAGAGAAACACCAGACAGTTGCTCTCCGAGTCAGCGCAGATCAATCTGTCATCAACCGATGTCGAATTGACGTGTTTCAAGACACTCTCTTTGCATACACCAACAGACAATTTTACCGTGATTCCTACATTACCGGTACAGTTGACTTTATCTTCGGGGACGCATCTGTTGTGTTCAGAAGAGTAAGCTCGTGGCCCAAAAGCCCATGA 765 0.4131 MDKANVIKRRVNSPKEELALNDCEQLMDLSIDRVWNSVLTLTNNNIDSKQNAHTWLSTVFTNHVTCLDGLEGSSLVVMESDLHDLISRARSYLAVLVAVFPSKDSDGFIEEKLNGDFPSWVTSKDMKLLESSIGDIKANVVVAKDGSGKFKTVAEAVASTPDNGNTSCCWGWFIAQDIGFKDTVGLEKHQTVALRVSADQSVINRCRIDVFQDTLFAYTNRQFYRDSYITGTVDFIFGDASVVFRRVSSWPKSP 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00655 254 Gene3D - 171 249 IPR012334 -
Car02g00655 254 PANTHER PECTINESTERASE 173 246 - -
Car02g00655 254 CDD PMEI-like_4 4 99 - -
Car02g00655 254 PANTHER PECTINESTERASE 5 166 - -
Car02g00655 254 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 100 IPR035513 -
Car02g00655 254 PANTHER PECTINESTERASE 173 246 - -
Car02g00655 254 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 9 90 IPR035513 -
Car02g00655 254 ProSitePatterns Pectinesterase signature 2. 229 238 IPR033131 -
Car02g00655 254 Pfam Pectinesterase 173 249 IPR000070 GO:0030599|GO:0042545
Car02g00655 254 Pfam Plant invertase/pectin methylesterase inhibitor 13 85 IPR006501 GO:0004857
Car02g00655 254 SUPERFAMILY Pectin lyase-like 137 246 IPR011050 -
Car02g00655 254 PANTHER PECTINESTERASE 5 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00655 Car-Chr2 8405655 8406688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00655 10 254 Carbohydrate Esterase AT1G11580 38.636 5.15e-59 194