Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00654 ATGGTCACAACCCAAGGTAGATATGATCCAAACCATAAGTCCGCAACTTCAATTCAACAATGTGACATAATACCAAGCTCGGACCTCAAACCCGTGGTGGGATCGATCAAAACATATCTAGGTCGTCCGTGGAAGAAATATTCAAGGACTGTTGTTCTACAATCCTCCATAGACAGCCACATCGACCCAACTGGATGGGCCGAGTGGAACGAGACGACTAAGGACTTTCTACAAACATTGTACTATGGGGAATACTTGAACAATGGACCAGGTGTTGATACCAGTAGGAGAGTGAATTGGCCTGGTTATCATGTCATCACAAGTGCAACAGAGGCTAGTAAGTTTACAGTAAAACAACTCATCGAAGGTAATGTTTGGTTGAAGAACACAGGAGTGGATTTTATTGAAGGCCTATAG 417 0.4341 MVTTQGRYDPNHKSATSIQQCDIIPSSDLKPVVGSIKTYLGRPWKKYSRTVVLQSSIDSHIDPTGWAEWNETTKDFLQTLYYGEYLNNGPGVDTSRRVNWPGYHVITSATEASKFTVKQLIEGNVWLKNTGVDFIEGL 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00654 138 SUPERFAMILY Pectin lyase-like 2 137 IPR011050 -
Car02g00654 138 Pfam Pectinesterase 1 124 IPR000070 GO:0030599|GO:0042545
Car02g00654 138 PANTHER PECTINESTERASE 1 137 - -
Car02g00654 138 PANTHER PECTINESTERASE 1 137 - -
Car02g00654 138 Gene3D - 1 138 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00654 Car-Chr2 8405224 8405640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00654 1 136 Carbohydrate Esterase AT1G11580 61.029 4.00e-54 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00654 K01051 - gmx:100815836 244.202