Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00651 ATGAAGAGGTCGAGAGAAGACGTTTTCATGACTTCGCCGCAACTCAAACGACCTATGGTTTCGTCTTCTAGAGGAGAAGGGTCGGGGCAACCTTTGATGATGAATGGAGGTGCTCAAAAGCTGACTACTAATGATGCATTAGCGTATCTTAAGGCAGTGAAGGATATATTTCAAGATAAGAAGGATAAATATGATGACTTTTTGGAGGTCATGAAAGATTTCAAAGCACAAAGAATTGATACTGCGGGTGTCATAGCAAGAGTGAAGGAACTTTTTGAAGGGCACAGAGATTTGATATTGGGATTTAACACCTTTTTGCCAAAGGGATATGAAATCACCCTTCCATTAGAGGACGAGGGACCTCATCCTAAAAAGCCTGTTGAATTTGAAGAAGCTATAAGTTTTGTGAACAAGATAAAGGCTCGATTTCAAGATGACGATCACGTTTACAAGTCATTTCTAGACATATTGAATATGTACAGAAAGGAAAATAAGGCTATCAACGATGTCTATCAGGAGGTTGCTGCACTTTTCCAAGATCACCCCGATCTTCTCGATGAGTTCATTCATTTTCTTCCTGACGCTTCTGCAGCTGCCTCTTCTCATGCTGTTGGTCGGCATTCTCTGCTTCGTGATAGGAGCTCTGCAATGCCAGCAGTGCGGCAAGTGCATGTTGAAAAGAGAGAAAGGACCATTGTTTCACATGGTGATCGTGATCCCAGTGTTGACCGTCCTGACCCAGATTATGACAGAAGTTTGTTGAGGATAGAAAAGGAGCAAAAGAGACGCCTGGAGAAGGAAAAGGACCGTAGAGAAGATAAAGACAGGAGAGAACGGGAAAGAAATGATAGAGATTATGAGCATGACGGGGGTCGAGATAGGGAGCGGTTTTCCCACAAACGGAAATCTGATCGTAAGGCTGAAGACTCAAGAGCTGAAGCATTGCTTGATGCAGATCAAAATTTTGGGATGTATAGTCAAGAGTTAGCTTTCTGTGATAAAGTCAAAGAGAAATTGCGAAATCCTGATGACTACCAGGAATTTTTGAAGTGTTTACATATTTACAGCAGGGAAATAATTACCCGACAAGAATTGCAGTCACTGGTGGGTGATTTACTTGGAAAGTATCCAGATCTTATGGAAGGGTTTAATGAATTTTTGCTACAAGCTGAGAAGAATGATGGTGGATTCCTTGCTGGTGTCATGAATAAAAAGTCCTTATGGATTGAAGGACATGGACTGAAACCAATGAAGGCTGAACAGAGGGATAGGGATAAAGATCGTTACAGGGATGATGGGATGAAGGAAAGGGATCGTGAATTTCGAGAAAGGGACAAATCGACTGTGATTTCTAACAAGGATGTTTCGGGTTCTAAGATGTCTCTATATCCCAGCAAGGATAAGTATCTTTCAAAACCAATAAATGAGCTTGACCTTTCGAACTGTGACCGGTGCACTCCCAGTTACCGTCTCCTACCAAAAAATTATCCAATACCTATAGCTAGCCAGAAAACAAAGCTTGGTGCAGAAGTGTTGAATGATCACTGGGTGTCTGTCACTTCAGGAAGTGAGGATTATTCCTTTAAACATATGCGCAAAAATCAGTATGAAGAGAGTTTGTTTAGATGTGAAGATGACAGATTTGAACTCGATATGTTGTTAGAGTCTGTAAACGCAACAACTAAACGAGTAGAAGAGCTTTTAGAAAAGATCAACAAAAATATAATTAAAGGAGACAGCCCGATTCGTATTGAGGAGCACTTAACAGCTCTAAATCTCAGGTGTATTGAACGGATATATGGTGACCATGGTCTTGATGCGTTGGAAGTTCTAAAGAAGAATGCATCTCTAGCTTTGCCAGTGGTATTAACACGCTTGAAGCAGAAACAGGAAGAGTGGGCAAGATGTCGTACTGACTTTAGTAAAGTTTGGGCTGAAATATATGCTAAGAATCATCACAAATCTCTTGATCATCGTAGCTTCTACTTTAAGCAACAGGACGCAAAAAGTTTGAGCACCAAAGCCTTGCTGGCCGAAATCAAAGAAATTAGTGACAAGAAACACAAAGAAGATGATGTTCTTCTTGCAATTGCTGCTGGAAATAGACGGCCTATTCTTCCAAACCTGGAGTTTGAGTATCTGGATCCAGACATTCATGAAGATTTGTATCAGCTTATAAAATATTCATGTGGAGAAGTTTGCACAACTGAACAGTTGGATAAAGTTATGAAGGTTTGGACAACATTTTTAGAACCCATGCTTTGTGTTCCTTCTCGGCCTCACGGTGCTGAGGATACTGAAGATGTAGTTGTGGCTAAGAATAATTCTGTCAGAGGTGTCGCTGAAAGCGAAGGTAGTCCTGGTGTTGTTGCTACCATAGTGAACCCAAAGCATATGAATTCTTCTAGAAATGGAGATGATTCTGTGCCATTAGATCAGTCAACTTCTAGCAAAGCATGGCAATCCAATGGTGATACAGGGGTTAGAGAAGATAAGTGTCTTGATTCAGACCGTAATGTGCGTAAAACTGAAACTTTCGGCAATAATACACAACACGCTAAATTGGATGTTAGTGCATTCATGCCTGATGAACCATCAGGAGTCAATACGCAAGAACACCCTGGTGAGCGGTTAGTGAGTGCTAATGTCTCTCCAGCATTTGGAATGGAGCCAAGTAATGGAAGAACGAAGACTGATAATACATCAGGACTGACTGCTACTCCATCTAGAAATGGTAATGTACCTGTTGCGGGAGGACTTGAATTACCTTCATCAGAGGGCGGTGATTCTGCAAGACCAGGTACATCCACAAATGGGGCCACTGCTGGAGGCACCGAAGTTTGCAGATACCAAGATGAAACAATTCAACACTTCAAAAGTGAAAGAGAAGAGGGCGAGTTATCTCCAAATGGAGACTTTGAAGAGGATAATTTTGCAGTTTATGGAGATACTGGTTTGGATGCAGTGCATAAAGGAAAGGATGGTGGGGTGAATCGGCAATACCAAAATAAACATGGGGAAGAAGCTTGTGGTGAAGCCAGAGGAGAAAATTATGTGGATGCTGATGATGAAGGTGAAGAAAGTCCTCACAGGTCATCAGATGACAGTGAAAATGCATCGGAAAATGTTTCTGGAAGCGAATCTGCCGATGGCGAGGAGTGTTCTCGAGAAGAGCATGAGGATGGGGAACATGATAACAAGGCTGAGAGTGAAGGTGAAGCTGAAGGAATGGCTGATGCCCATGACGTTGAAGGAGATGGAATGCCATTGCCATTTTCAGAACGCTTTCTATTAAACGTGAGGCCATTGGCAAAGCATGTTTCCCCAGTATTACACGACAAGGACAGGAATTCTCAAGTTTTTTATGGAAACGACTCCTTTTATGTGCTGCTTAGACTTCATCAGACATTGTATGAGAGGATTCATTCAGCAAAGGTTAACTCATCATCCGCTGAAAGGAAATGGAGGGCCTCAAATAATACAAGCTCTACTGATCAATATGACAGGCTCATGAATGCCCTTTACAGTTTGCTGGATGGTTCTTCTGATAATACAAAATTTGAGGATGATTGTCGAGCTATCATTGGAACTCAATCATATCTCTTATTCACGTTAGACAAACTGATATATAAACTTGTTAAACAGCTTCAAGCTGTTGCCAGTGATGAGATGGACAATAAGCTTCTCCAATTATATGCATATGAAAAATCAAGAAAGTTTGGAAAGTTCATTGATATAGTTTATCACGAAAATGCTCGTATTCTTCTTCATGAGGAGAACATTTATCGTATTGAATACTCACCAAAACCAAAGACACTGTCTATTCAACTCATGGACTGTGGACATGATAAGCATGAAGTGACTGCTGTGTCAATGGACCCTAATTTTTCAGCCTATCTGCACAATGACTTCCTCTCTATTGTCCCTGAGAAAAAGAAGTCAGGGATTTTCATGAATAGGAATAAACGTGGATATGCCGGTAGTGATGATGAGTTTTCAAGCCAAGCTATGGAAGGACTACAAATTATTAATGGTCTGGAGTGTAAGATAGCTTGCAATTCTTCTAAGGTGTCATACGTTTTAGATACAGAAGACTACTTGTATCGGGTGAGAAGCAGAAGAAAAGCCTTGCATCTGAAGAGTTCATGCCATGAACAAGAAAAGTCTTCAGACATTCGATCAAGCAGAGCAGCAAGGTTCCGCAAATTGTTTTCTGCCACATGA 4224 0.4117 MKRSREDVFMTSPQLKRPMVSSSRGEGSGQPLMMNGGAQKLTTNDALAYLKAVKDIFQDKKDKYDDFLEVMKDFKAQRIDTAGVIARVKELFEGHRDLILGFNTFLPKGYEITLPLEDEGPHPKKPVEFEEAISFVNKIKARFQDDDHVYKSFLDILNMYRKENKAINDVYQEVAALFQDHPDLLDEFIHFLPDASAAASSHAVGRHSLLRDRSSAMPAVRQVHVEKRERTIVSHGDRDPSVDRPDPDYDRSLLRIEKEQKRRLEKEKDRREDKDRRERERNDRDYEHDGGRDRERFSHKRKSDRKAEDSRAEALLDADQNFGMYSQELAFCDKVKEKLRNPDDYQEFLKCLHIYSREIITRQELQSLVGDLLGKYPDLMEGFNEFLLQAEKNDGGFLAGVMNKKSLWIEGHGLKPMKAEQRDRDKDRYRDDGMKERDREFRERDKSTVISNKDVSGSKMSLYPSKDKYLSKPINELDLSNCDRCTPSYRLLPKNYPIPIASQKTKLGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNATTKRVEELLEKINKNIIKGDSPIRIEEHLTALNLRCIERIYGDHGLDALEVLKKNASLALPVVLTRLKQKQEEWARCRTDFSKVWAEIYAKNHHKSLDHRSFYFKQQDAKSLSTKALLAEIKEISDKKHKEDDVLLAIAAGNRRPILPNLEFEYLDPDIHEDLYQLIKYSCGEVCTTEQLDKVMKVWTTFLEPMLCVPSRPHGAEDTEDVVVAKNNSVRGVAESEGSPGVVATIVNPKHMNSSRNGDDSVPLDQSTSSKAWQSNGDTGVREDKCLDSDRNVRKTETFGNNTQHAKLDVSAFMPDEPSGVNTQEHPGERLVSANVSPAFGMEPSNGRTKTDNTSGLTATPSRNGNVPVAGGLELPSSEGGDSARPGTSTNGATAGGTEVCRYQDETIQHFKSEREEGELSPNGDFEEDNFAVYGDTGLDAVHKGKDGGVNRQYQNKHGEEACGEARGENYVDADDEGEESPHRSSDDSENASENVSGSESADGEECSREEHEDGEHDNKAESEGEAEGMADAHDVEGDGMPLPFSERFLLNVRPLAKHVSPVLHDKDRNSQVFYGNDSFYVLLRLHQTLYERIHSAKVNSSSAERKWRASNNTSSTDQYDRLMNALYSLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQAVASDEMDNKLLQLYAYEKSRKFGKFIDIVYHENARILLHEENIYRIEYSPKPKTLSIQLMDCGHDKHEVTAVSMDPNFSAYLHNDFLSIVPEKKKSGIFMNRNKRGYAGSDDEFSSQAMEGLQIINGLECKIACNSSKVSYVLDTEDYLYRVRSRRKALHLKSSCHEQEKSSDIRSSRAARFRKLFSAT 1407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00651 1407 MobiDBLite consensus disorder prediction 991 1087 - -
Car02g00651 1407 ProSiteProfiles PAH domain profile. 318 390 IPR003822 GO:0006355
Car02g00651 1407 MobiDBLite consensus disorder prediction 222 312 - -
Car02g00651 1407 MobiDBLite consensus disorder prediction 828 842 - -
Car02g00651 1407 SUPERFAMILY PAH2 domain 39 108 IPR036600 GO:0006355
Car02g00651 1407 SUPERFAMILY PAH2 domain 122 194 IPR036600 GO:0006355
Car02g00651 1407 Coils Coil 254 281 - -
Car02g00651 1407 MobiDBLite consensus disorder prediction 795 855 - -
Car02g00651 1407 MobiDBLite consensus disorder prediction 991 1037 - -
Car02g00651 1407 MobiDBLite consensus disorder prediction 795 824 - -
Car02g00651 1407 MobiDBLite consensus disorder prediction 929 944 - -
Car02g00651 1407 Gene3D Paired amphipathic helix 45 107 IPR036600 GO:0006355
Car02g00651 1407 Pfam Paired amphipathic helix repeat 148 192 IPR003822 GO:0006355
Car02g00651 1407 Pfam Paired amphipathic helix repeat 62 106 IPR003822 GO:0006355
Car02g00651 1407 Pfam Paired amphipathic helix repeat 343 387 IPR003822 GO:0006355
Car02g00651 1407 Gene3D Paired amphipathic helix 322 391 IPR036600 GO:0006355
Car02g00651 1407 MobiDBLite consensus disorder prediction 1050 1082 - -
Car02g00651 1407 MobiDBLite consensus disorder prediction 418 448 - -
Car02g00651 1407 SMART hdac_interact2seq4b 481 581 IPR013194 -
Car02g00651 1407 MobiDBLite consensus disorder prediction 214 312 - -
Car02g00651 1407 Coils Coil 550 574 - -
Car02g00651 1407 Pfam Sin3 family co-repressor 484 574 IPR013194 -
Car02g00651 1407 PANTHER PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 2 ISOFORM X1 2 1386 - -
Car02g00651 1407 ProSiteProfiles PAH domain profile. 125 195 IPR003822 GO:0006355
Car02g00651 1407 PANTHER SIN3B-RELATED 2 1386 IPR039774 GO:0003714
Car02g00651 1407 MobiDBLite consensus disorder prediction 884 945 - -
Car02g00651 1407 Pfam C-terminal domain of Sin3a protein 1121 1367 IPR031693 -
Car02g00651 1407 Gene3D Paired amphipathic helix 124 196 IPR036600 GO:0006355
Car02g00651 1407 ProSiteProfiles PAH domain profile. 39 109 IPR003822 GO:0006355
Car02g00651 1407 MobiDBLite consensus disorder prediction 886 912 - -
Car02g00651 1407 SUPERFAMILY PAH2 domain 325 389 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00651 Car-Chr2 8332197 8343993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00651 30 144 WRKY Transcription Factor Family AT4G12020 49.573 3.42e-24 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car02g00651 Sin3a_C 1.1e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00651 K11644 - gmx:100811928 2243.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00651 02 8332197 8343993 Car07g02029 07 24185888 24198128 PCT