Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00643 ATGGAATCAAACGGTGTCGTTGCTATTGGTGTGGATTCTGAAGAGGTTCATGTATTGGCTGTTGATGATAGTCTCGTTGATCGGAAAGTTATTGAACGTTTGCTCAAAATTTCAGCTTGTAAAGTTACTGCTGTGGATAGTGGAATCAGAGCACTACAATTTCTGGGGTTGGATGAACAGAGAAAAACCTCTGAATCTGATGATTTTGTCCCGGGTTTGAAGGTGGATCTAGTCATTACAGATTATTGCATGCCAGGAATGACTGGTTATGAGTTGCTCAAAAAAATCAAGGAATCGTCCACTTTTAAAGAAATTCCAGTAGTTATTATGTCTTCTGAAAACATTTTGCCACGCATAGACAGATGTTTAGAGGAAGGTGCAGAGGATTATATAGTGAAGCCAGTGAAGCTATCTGACGTGAAACGTTTGAAGGGTTACATGACGACGTTGAAGGAAGTTAGAGAAGTtaactttaacggtaacagtaacggtgaaggtGGTGATGGTGATGGTGTAGGGATCAACAACAAAAGGAAGCTAGAAGAATCGTCCGATCTGtcatcatcactaccgtcgatttcatcatcaatactttcatcatcaccgtcaccttcatcatctccttcatcttcaCCTGGCGTGCTTGATTCTCCAATCACACGGCTTAAAATGACCGGCATCGAATGA 687 0.3508 MESNGVVAIGVDSEEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRKTSESDDFVPGLKVDLVITDYCMPGMTGYELLKKIKESSTFKEIPVVIMSSENILPRIDRCLEEGAEDYIVKPVKLSDVKRLKGYMTTLKEVREVNFNGNSNGEGGDGDGVGINNKRKLEESSDLSSSLPSISSSILSSSPSPSSSPSSSPGVLDSPITRLKMTGIE 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00643 228 MobiDBLite consensus disorder prediction 185 216 - -
Car02g00643 228 CDD REC_typeA_ARR 18 143 - -
Car02g00643 228 Pfam Response regulator receiver domain 18 140 IPR001789 GO:0000160
Car02g00643 228 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 225 IPR045279 GO:0009736
Car02g00643 228 MobiDBLite consensus disorder prediction 157 228 - -
Car02g00643 228 ProSiteProfiles Response regulatory domain profile. 17 148 IPR001789 GO:0000160
Car02g00643 228 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 10 225 - -
Car02g00643 228 SUPERFAMILY CheY-like 16 142 IPR011006 -
Car02g00643 228 Gene3D - 16 184 - -
Car02g00643 228 SMART REC_2 16 147 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00643 Car-Chr2 8252641 8254092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00643 11 219 Response Regulator Gene Family AT1G59940 56.872 1.03e-72 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car02g00643 Response_reg 5.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00643 K14492 - gmx:100779833 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00643 02 8252641 8254092 Car02g00643 02 8252641 8254092 ECH