Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00634 ATGGAAAAGGAAATGTGTGACATTTCTCATACATGGGATGGTGAAAATGGAAATTCAGTTGAAAAGAGGCTTAGGCTATTTGGCTTTGAGCTAAATCCAACAAAAAATAATGAAGGGCTTGTGAAAGAGTCTAATAATGAAGGAGATGAAAGTGTGAATTCATCTAACTCAATTTCATCCGGAGGAGAGAAAATTGTTGAAGAGAAAACCTCAACTAGAGGCCAAGATGAGAGAAAATTTGAGTGTCAATATTGTTTCAAAGAATTTGCAAACTCACAAGCATTAGGAGGTCATCAAAATGCACACaagaaagaaagaatgaagaaaaaaagaTTGCAACTTCAAGCTAGAAAAGCTAGTATAAACTATTACCTACAACCTTTTCAAACCAATAACCATCATGGTAGTTTTGCTAATTACCATGGAAATGATACTCATAATTGGTTTTATGACCCTTCTTCTTATAATAACTCTGAATTCTCCTTGTGTGAAGAATCTCAAATTAGTTTCAAGTCAAATGTTCATGACACTACCAACTCTTTTGTTGATCAAAAATCTAGTTGGTATTCTTTGCCTTCACATAATCCTCCTTCTCAACAAGATAATTGCATGTTTACTTTCTCCAATAAAGATGATAGGCCTTTCATCTTTAAGCCTTCTTCAAACCAAATTCATACTAAAGGTTTAGATCTTCAACTAGGCCTCAATTTGAAGTCAAGTACAAAAAGGACATAA 735 0.3279 MEKEMCDISHTWDGENGNSVEKRLRLFGFELNPTKNNEGLVKESNNEGDESVNSSNSISSGGEKIVEEKTSTRGQDERKFECQYCFKEFANSQALGGHQNAHKKERMKKKRLQLQARKASINYYLQPFQTNNHHGSFANYHGNDTHNWFYDPSSYNNSEFSLCEESQISFKSNVHDTTNSFVDQKSSWYSLPSHNPPSQQDNCMFTFSNKDDRPFIFKPSSNQIHTKGLDLQLGLNLKSSTKRT 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00634 244 ProSiteProfiles Zinc finger C2H2 type domain profile. 80 107 IPR013087 -
Car02g00634 244 Gene3D Classic Zinc Finger 52 134 - -
Car02g00634 244 PANTHER ZINC FINGER PROTEIN 5 15 237 - -
Car02g00634 244 ProSitePatterns Zinc finger C2H2 type domain signature. 82 102 IPR013087 -
Car02g00634 244 PANTHER ZINC FINGER PROTEIN 5 15 237 IPR044299 GO:0010090
Car02g00634 244 MobiDBLite consensus disorder prediction 34 73 - -
Car02g00634 244 MobiDBLite consensus disorder prediction 37 65 - -
Car02g00634 244 SUPERFAMILY beta-beta-alpha zinc fingers 76 107 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00634 Car-Chr2 8138994 8140205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00634 77 123 C2H2 Transcription Factor Family AT1G68360 72.917 9.12e-17 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car02g00634 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00634 - - gmx:100527006 297.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00634 02 8138994 8140205 Car02g00634 02 8138994 8140205 ECH