Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00624 ATGGGGATTGTGGCAGCAGGTCTTACACAATACAGAGTTTACTCTACTGATGAAGTGATGATATTGCTTCAGCAAGGAAATCATAACAGAACTACAGAACCAACTCGTGCAAATGAAACATCTTCACGTTCCCATGCTGTCTTGCAGGTTGTTGTTGAATACCAAGTTAGAGATGCTGCAATGAATATTATTAAAAATGTGGGAAAGCTCTCGTTGGTTGATCTTGCAGGGTCAGAGAGAGCTCTTGCCACAGATCAAATAACACTTAGATCTCTTGAGGGTGCCAACATTAATCGGTCTCTTCTTGCACTAAGCAGCTGCATCAATGCTCTTGTAGATGGAAAGAAGCATATACCATACCGAAATTCAAAATTGACTCAGCTTCTCAAAGATTCACTAGGAGGAACATGCAGCACTGTCATGATTGCTAACATAAGCCCAAGTAGCCTCTCATCTGGTGAAACTCAAAACACCCTTCATTGGGCTGATAGAGCCAAGGAGATTCGAACAAAGGAAAATGATGCAAATGAGGATCTATTTCCAGTAATTGAAACAGGAACAGACCAGGCCAAGCTActgttGGATCCTCAAGATGAAAGTATCAACGAACTTGACAAGTCTTTGGATCCTGAGCCAACTGATGCGAACGTTTCTAGCGAACCTCAGAAATTAAATAATAAAAAGATAAAATCATCTTCCGACGATACGAAAATTGTTAACCTTGAAACTAATGAAAATAGAAGAGAAAATGCACCACTTTCATCAACAAGCATGGCAAGCAGAGACGGTGAAGTCGAGAATTTAAATTATGCTGACAGAAGACCACAACACCGTGATGCTGAAAACGAGTCAACCTTGCCGTACTGCCCGCCTGATCTAAACAAGAACATTACAGAGATATTCAAGAAACTTGTGAACATATATAGAGCATTGGGTGATGACCGGAGATCTTTTAGCTATTACAAGGCTATTTCAGTGATTGAGAAGTTGCCATTTAAAGTTGAAAGTGCAGACCAGATAAAAAACCTCCCGTCAATTGGAAAGTCAATGAAGGATCATGAGATAATCACTACTGGGAAGTTATTGAAATTGGAACACTTTGAAACTGATGAAAAGGGTGCAAACAATATCGTTATTTGGAGAAGTATGGGGTATAGGTCCAGCCACAGActctaa 1176 0.398 MGIVAAGLTQYRVYSTDEVMILLQQGNHNRTTEPTRANETSSRSHAVLQVVVEYQVRDAAMNIIKNVGKLSLVDLAGSERALATDQITLRSLEGANINRSLLALSSCINALVDGKKHIPYRNSKLTQLLKDSLGGTCSTVMIANISPSSLSSGETQNTLHWADRAKEIRTKENDANEDLFPVIETGTDQAKLLLDPQDESINELDKSLDPEPTDANVSSEPQKLNNKKIKSSSDDTKIVNLETNENRRENAPLSSTSMASRDGEVENLNYADRRPQHRDAENESTLPYCPPDLNKNITEIFKKLVNIYRALGDDRRSFSYYKAISVIEKLPFKVESADQIKNLPSIGKSMKDHEIITTGKLLKLEHFETDEKGANNIVIWRSMGYRSSHRL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00624 391 Gene3D - 269 369 IPR027421 -
Car02g00624 391 SMART kinesin_4 1 176 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car02g00624 391 MobiDBLite consensus disorder prediction 203 257 - -
Car02g00624 391 MobiDBLite consensus disorder prediction 227 244 - -
Car02g00624 391 PRINTS Kinesin heavy chain signature 35 52 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car02g00624 391 PRINTS Kinesin heavy chain signature 69 87 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car02g00624 391 PRINTS Kinesin heavy chain signature 118 139 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car02g00624 391 ProSitePatterns Kinesin motor domain signature. 68 79 IPR019821 GO:0003777|GO:0005524|GO:0007018
Car02g00624 391 ProSiteProfiles Kinesin motor domain profile. 1 168 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car02g00624 391 PANTHER KINESIN-LIKE PROTEIN 2 283 - -
Car02g00624 391 MobiDBLite consensus disorder prediction 212 226 - -
Car02g00624 391 Pfam Kinesin motor domain 3 168 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car02g00624 391 Pfam Helix-hairpin-helix domain 294 353 IPR010996 -
Car02g00624 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 171 IPR027417 -
Car02g00624 391 PANTHER CENTROMERE PROTEIN E 2 283 - -
Car02g00624 391 Gene3D Kinesin motor domain 1 207 IPR036961 -
Car02g00624 391 SUPERFAMILY DNA polymerase beta, N-terminal domain-like 289 367 IPR027421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00624 Car-Chr2 7971914 7977317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00624 3 174 Calmodulin-binding Proteins AT5G65930 41.714 1.00e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00624 K10401 - gmx:100798358 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00624 02 7971914 7977317 Car02g00624 02 7971914 7977317 ECH