Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00621 ATGTCGCTTtcctactccaacttcttctccgactccgacctccTATGCGGCGAGGACACCTCAAGCATCTTGTCCGGCGATTCGCCGGCGGAATGCTTCTCCGACCTCGATTCGTCGCCGCCGTCGGATGAAGACTCTATCGCTGGATTAATCGAAGATGAACGCAAGTTCGTCCTTGGATTCGAATATTTCTCCAGGTTTCAGTCTCGCTCGCTCGATGCTTCCGCTAGAGAAGAATCCGTTGCATGGATCTTAAAGGTGCAGGCTTGTTATGGTTTTCAACCGTTGACGGCTTATCTTTCCGTCAACTACATGGATCGGTTCTTGAATTCTCGGCGATTGCCGCAAACAAATGGGTGGCCACTGCAACTTCTAGCAGTTGCTTGCTTGTCTTTAGCGGCAAAGATGGAGGAATCTTTAGTCCCTTCTTTATTGGACCTTCAGGTAGAAGGTGCCAAATACATATTTGAGCCCAAAACAATTAGAAGAATGGAGTTTCTTGTTCTAAGCGTCTTGGATTGGAGGCTAAGATCAGTTACTCCATTTAGCTTCCTCAGTTTCTTTGCGTGCAAGTTAGATTCAACTGCAACTTTTACTGGGTTCCTCATTTCACGTTCTACACAAATTATCTTATCTAATATCCAAGAGGCTAGCTTTCTTGCATATTGGCCATCATGCATTGCTGCCTCAGCTATACTTTATGCAGCTAATGAAATTCCTAATTGGTCTCTCGTTAATCCGGAGCATGCCGAGTCGTGGTGCGAGGGGTTAACAAAAGAGAAAATTATTGGGTGCTACAGGTTAATGCAAGAACTTGTGATTGACAATAACATGAGGAAACCTCCTAAAGTGTTGCCACAGCTACGAGTGACAACTCAGCCCCTTATGAGGTCAAGTGTctcgtcatcctcctcttctccttcctcctcatccacctATAAAAGAAGAAAATTAAATAACTCTTTGTGGGTAGATGATGACAAATGA 987 0.4103 MSLSYSNFFSDSDLLCGEDTSSILSGDSPAECFSDLDSSPPSDEDSIAGLIEDERKFVLGFEYFSRFQSRSLDASAREESVAWILKVQACYGFQPLTAYLSVNYMDRFLNSRRLPQTNGWPLQLLAVACLSLAAKMEESLVPSLLDLQVEGAKYIFEPKTIRRMEFLVLSVLDWRLRSVTPFSFLSFFACKLDSTATFTGFLISRSTQIILSNIQEASFLAYWPSCIAASAILYAANEIPNWSLVNPEHAESWCEGLTKEKIIGCYRLMQELVIDNNMRKPPKVLPQLRVTTQPLMRSSVSSSSSSPSSSSTYKRRKLNNSLWVDDDK 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00621 328 CDD CYCLIN 83 169 IPR013763 -
Car02g00621 328 PANTHER CYCLINS 1 320 IPR039361 -
Car02g00621 328 SUPERFAMILY Cyclin-like 161 274 IPR036915 -
Car02g00621 328 SUPERFAMILY Cyclin-like 35 176 IPR036915 -
Car02g00621 328 SMART Cyclin_C_2 179 306 IPR004367 -
Car02g00621 328 Pfam Cyclin, C-terminal domain 179 288 IPR004367 -
Car02g00621 328 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 320 - -
Car02g00621 328 MobiDBLite consensus disorder prediction 295 328 - -
Car02g00621 328 Pfam Cyclin, N-terminal domain 49 176 IPR006671 -
Car02g00621 328 Gene3D - 50 240 - -
Car02g00621 328 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Car02g00621 328 Gene3D - 60 177 - -
Car02g00621 328 MobiDBLite consensus disorder prediction 295 318 - -
Car02g00621 328 SMART cyclin_7 82 170 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00621 Car-Chr2 7911718 7916181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00621 1 327 Core Cell Cycle Gene Families AT1G70210 64.848 2.00e-138 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00621 K18810 - gmx:100775224 516.538