Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00597 ATGGGAAACAATTGTGTTGGATCAATAACCTCTAAAGATGAAATTCTTTCCTTTATTCTTCCAATTTCATTGTGGTGGTCACATCCGATCAATGTAATAGAAATTTCCAATTCATATTCACCAAACACAAATGCTTCAGAGACTGTTCAACAAAATCCACCAATGGTAGTGAAAATTGTCAACAAAGAGATAaataataatgatgatgataataataataataataataatagtaataaGCCTTCAGAGGAACAACAAACTTGTATATCAAAAGATTCAGAACAACCAGTTATTATGGTGTTGAAGGAACAaaaaccaaaaccaaaaccaaatccaaaaccaaTGATGTTGCAAAATATTAAGAGGGTAGTAGCAAAAAGTGCTGGTCTTCAAGCAGAATCAGTTTTGCTGACAAACAGAGGTCATTTTAAGGAGTACTATAAATTGGGAGATGAACTTGGGAAAGGACAATATGGAATTACTTCACTTTGCTTGGAGAAATCAACGGGGAATAACTATGCATGCAAGTCCATTCCAAAGGTGAAATTGATAAGAGATGATGATTTGGAGGATGTAAGGAGGGAGATTCAGATAATGCATCACTTGGTTGAGAGTCCTAATGTGATTTCCATTAAAGGAGCTTATGAAGATGCTGTTGCTGTTCATGTTGTTATGGAATTATGTGAAGGGGGTGAGTTGTTTGATAGGATTGTGGAAAGGGGTCATTATACAGAAAGAAAGGCTGCTAAACTTGCAAAGACTATTGTTAGTGTTGTAGAGGCTTGTCATTCGCTTGGTGTAATGCATCGCGATCTTAAGCCTGAGAATTTTCTTTTTGTTGATGGAAGTGAAGATTCAACTCTCAAGGCAATAGATTTTGGAATGTCTGTGTTCTTCAAACCAGGAGAAAAGTTTAGGGATGTGGTAGGAAGTCCTTATTATATTGCACCTGAGGTTCTAAGGCAGTGTTATGGTCCAGAAGCTGATGTGTGGAGTGCAGGTGTGATCATATACATTCTCTTATGTGGAACACCTCCTTTTTGGGGTGAATTGGATCAAGAGATATTTGATGAGATCTTGTATGGTGATCTTGATTTCTCTTCTGATCCTTGGCCAAGTATATCTGAAAGTGCAAAAGACTTGCTTAGCAAGATGCTTGTTAGAGATCCTACAAAACGGATAACAGCACATGAAGTTCTTTGTCACCCTTGGATCCAGGTTGATGGAGTTGCTTCAGACAAGCCTCTTGATTCTGCAGTTTTGAGTCATCTAAAGCATTTTTCTGCTATGAACAAGCTCAAGAAAATGGCTCTTAGAGTTATTGCCGAGAATCTACCTGAAGAAGAAATTTATGGGTTGAAAAAATTGTTTAAGACGATAGACACGGACAATAGTGGTCAAATTACTTTCGAAAAACTCAAAGTTGGACTGAAAATGTTTGGTGCCAATCTCAGTGAATCCGAAATTTTCGATCTAATGCAAGCTGCAGATGTTAATAATAGTGGCACAATTGACTATAGAGAATTTATAGCTGCAACATTACATTTAAACAAAGTTGGAAGGGAAGATCATTTAGTTGCAGCTTTCTCATACTTTGATAAAGATGGAAGTGGCTACATCACTCAAGATGAACTTCAACAAGCTTGTAAAGAATTTGGCATTGAGGATGTCCACTTGGAGGAAATGATCAGAGAAGCTGATCAGAATAATGATGGCCAAATAGACTACAATGAATTTGTGGCTATGATGCAAAGAGGCAATGCAGATTTAGGTAATAGTGTTCTAAAGTGTAGCACTAGCTTTAACATTGGATTAAGGAAGACCGAGGCATTATCAGTATGTTAA 1845 0.3599 MGNNCVGSITSKDEILSFILPISLWWSHPINVIEISNSYSPNTNASETVQQNPPMVVKIVNKEINNNDDDNNNNNNNSNKPSEEQQTCISKDSEQPVIMVLKEQKPKPKPNPKPMMLQNIKRVVAKSAGLQAESVLLTNRGHFKEYYKLGDELGKGQYGITSLCLEKSTGNNYACKSIPKVKLIRDDDLEDVRREIQIMHHLVESPNVISIKGAYEDAVAVHVVMELCEGGELFDRIVERGHYTERKAAKLAKTIVSVVEACHSLGVMHRDLKPENFLFVDGSEDSTLKAIDFGMSVFFKPGEKFRDVVGSPYYIAPEVLRQCYGPEADVWSAGVIIYILLCGTPPFWGELDQEIFDEILYGDLDFSSDPWPSISESAKDLLSKMLVRDPTKRITAHEVLCHPWIQVDGVASDKPLDSAVLSHLKHFSAMNKLKKMALRVIAENLPEEEIYGLKKLFKTIDTDNSGQITFEKLKVGLKMFGANLSESEIFDLMQAADVNNSGTIDYREFIAATLHLNKVGREDHLVAAFSYFDKDGSGYITQDELQQACKEFGIEDVHLEEMIREADQNNDGQIDYNEFVAMMQRGNADLGNSVLKCSTSFNIGLRKTEALSVC 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00597 614 ProSitePatterns Protein kinases ATP-binding region signature. 153 176 IPR017441 GO:0005524
Car02g00597 614 Gene3D - 413 588 - -
Car02g00597 614 ProSiteProfiles EF-hand calcium-binding domain profile. 558 589 IPR002048 GO:0005509
Car02g00597 614 ProSitePatterns EF-hand calcium-binding domain. 497 509 IPR018247 -
Car02g00597 614 SMART serkin_6 147 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00597 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Car02g00597 614 ProSitePatterns EF-hand calcium-binding domain. 567 579 IPR018247 -
Car02g00597 614 Pfam Protein kinase domain 147 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00597 614 ProSiteProfiles EF-hand calcium-binding domain profile. 484 519 IPR002048 GO:0005509
Car02g00597 614 Gene3D Phosphorylase Kinase; domain 1 149 232 - -
Car02g00597 614 ProSiteProfiles EF-hand calcium-binding domain profile. 453 483 IPR002048 GO:0005509
Car02g00597 614 ProSiteProfiles Protein kinase domain profile. 147 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00597 614 ProSiteProfiles EF-hand calcium-binding domain profile. 520 555 IPR002048 GO:0005509
Car02g00597 614 Pfam EF-hand domain pair 465 515 IPR002048 GO:0005509
Car02g00597 614 SUPERFAMILY EF-hand 444 585 IPR011992 -
Car02g00597 614 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 93 591 - -
Car02g00597 614 Pfam EF-hand domain pair 524 584 IPR002048 GO:0005509
Car02g00597 614 MobiDBLite consensus disorder prediction 66 90 - -
Car02g00597 614 MobiDBLite consensus disorder prediction 64 90 - -
Car02g00597 614 SMART efh_1 524 552 IPR002048 GO:0005509
Car02g00597 614 SMART efh_1 558 586 IPR002048 GO:0005509
Car02g00597 614 SMART efh_1 452 480 IPR002048 GO:0005509
Car02g00597 614 SMART efh_1 488 516 IPR002048 GO:0005509
Car02g00597 614 Gene3D Transferase(Phosphotransferase) domain 1 233 412 - -
Car02g00597 614 PANTHER SERINE/THREONINE-PROTEIN KINASE 93 591 - -
Car02g00597 614 CDD STKc_CAMK 147 404 - -
Car02g00597 614 CDD EFh 524 584 IPR002048 GO:0005509
Car02g00597 614 ProSitePatterns EF-hand calcium-binding domain. 533 545 IPR018247 -
Car02g00597 614 SUPERFAMILY Protein kinase-like (PK-like) 145 406 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00597 Car-Chr2 7117259 7121850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00597 1 606 EF-hand Containing Proteins AT3G10660 60.247 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car02g00597 Pkinase 1.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00597 K13412 - gmx:100814475 861.292