Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00584 ATGGGGAAAAAAGGGAGTTGGTTTTCTGCAGTGAAGAAATTTCTTAGTCATGATTCCAGAAAAGATAAGaaaagtcacagattaaagaaaaagTGTACTCAAAAGGACTCAGAAGAAGCACCAATAGATGATGTTAAATTAACTGAGGCGGAGAGTGAACAAAATAAACATGCTATTTCTCTGGCTTTtgctgctactgtcgccgcgggggccgccgttgctgctgctcaggctgctgcAGAAGTTGTTCGTCTTACGAGTATGCCTCTTTACCCCGGAAAGACTAAGGAAGATATGGCAGCTATCAAGATTCAGACAGCATTCCGTGGATATTTGGCAAGAAGAGCATTGTGTGCCTTGAGAGGTTTGGTGAGGTTGAAGGCATTGATGCATGGGAAATCTGTTAAAAGGCAAGCAACTAGCACCTTAAGATGCATGCAAACTCTAGCAAGATTGCAGTCAGAGGTTCGCGAAAGGAGAATTCGAGTTTTCGAGGAGAATCGGGTTCTTCAGCGGCAACTACAACAGAAACACCAAAAAGAACTTATCAAGCTGCAAACTGGTCAGGTTGGAGAAGAATGGGATGACAGGTTGCAATCAAAGGAACAAATTGAAGCAAAATTGTTGCAGAGGCAACAAGCTTCCCTTAAAAGAGAGAGGGCTTTGGCCTATTCATTCTCACATCAGCAAACATGGAAGAACACTTCAAAATCTACAAACCTAACATTTATGAACCCAAACAATCCTCATTGGGGCTGGAGCTGGCTAGAGAGATCGATGGCTACTCGACCATGGGAAGACGAAACCATTATGAATCACAATGATCATGCATCAAAGGCAATAAGACCTGCATCAACTTCAACTACACCAGCTTCAAAGGCAACTAGGGCATCAAGCTCGAAGAGTGGTCGTGATATCGATGACTCAAGAAGCATGTATAGCGTTCATTCTGAACGCTATCGAAGATATAGTAGCATTGCAGGATCATCAATGAAAGATGATGAGAGCGTTGAAAGCTCGCCGGCGTTTCCAAGTTACATGGCACTGACAAGTTCAGCAAAGGCAAGGTCCAAAGTACTGCAAAGACCATCTCCACCTAATAATCTTTCTGCAAAGAAGAGGCTTTCTTTTCCTGCTTCTCCAATTGGTTCAAGAAGGCATTCCGGTCCACCTAAGGTGGAAATATAA 1188 0.3998 MGKKGSWFSAVKKFLSHDSRKDKKSHRLKKKCTQKDSEEAPIDDVKLTEAESEQNKHAISLAFAATVAAGAAVAAAQAAAEVVRLTSMPLYPGKTKEDMAAIKIQTAFRGYLARRALCALRGLVRLKALMHGKSVKRQATSTLRCMQTLARLQSEVRERRIRVFEENRVLQRQLQQKHQKELIKLQTGQVGEEWDDRLQSKEQIEAKLLQRQQASLKRERALAYSFSHQQTWKNTSKSTNLTFMNPNNPHWGWSWLERSMATRPWEDETIMNHNDHASKAIRPASTSTTPASKATRASSSKSGRDIDDSRSMYSVHSERYRRYSSIAGSSMKDDESVESSPAFPSYMALTSSAKARSKVLQRPSPPNNLSAKKRLSFPASPIGSRRHSGPPKVEI 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00584 395 MobiDBLite consensus disorder prediction 18 44 - -
Car02g00584 395 MobiDBLite consensus disorder prediction 350 374 - -
Car02g00584 395 MobiDBLite consensus disorder prediction 274 313 - -
Car02g00584 395 ProSiteProfiles IQ motif profile. 97 125 IPR000048 GO:0005515
Car02g00584 395 PANTHER PROTEIN IQ-DOMAIN 1-LIKE 285 394 - -
Car02g00584 395 PANTHER PROTEIN IQ-DOMAIN 1-LIKE 23 281 - -
Car02g00584 395 PANTHER IQ-DOMAIN 5-RELATED 285 394 - -
Car02g00584 395 PANTHER IQ-DOMAIN 5-RELATED 23 281 - -
Car02g00584 395 MobiDBLite consensus disorder prediction 350 395 - -
Car02g00584 395 Gene3D iswi atpase 94 121 - -
Car02g00584 395 MobiDBLite consensus disorder prediction 279 299 - -
Car02g00584 395 Pfam IQ calmodulin-binding motif 99 117 IPR000048 GO:0005515
Car02g00584 395 SMART iq_5 96 118 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00584 Car-Chr2 6989762 6993351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00584 1 394 IQD Protein Family AT5G03040 45.733 2.84e-110 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00584 - - cam:101501235 709.909