Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00580 ATGCCGCTGGAACCGATACCGTTGGATCGAAAGAACTCGTATAGGGAGCGGAAGCAAGGGAGTTCTGAGTCTTTAGGATCAGTGGCTAGATGGAGAGGCTCGTCTTCTCATCATCATCAACGCCGTGCTGCCGATTTTCGAAGATTTGCAGGTCATCATCGTAAGCAAGGTGGTTGGCAGTTATTTCCAGAAGAATCTGGTCATGAGCGCATGCTTTCTCGATCCTGTGACAAGATGCTGGAGGAAGATAACTGTCGGCCATCAGTCTCTCGAGGGGATGGAAAGTATGGAAGGGGTAATAAGGAAAGTAAAGGAGCCTTTAGCCAGAGAGAATGGAGAGGGCGTTCATGGGAAACCACAAACAGCTCTCTGAATACATACAGGAGGCAAATTGATGTCAATAATGACCGTAGGTCAGTCGATGATATGCTAACATATTCCTCTCATCCAAATTCTGACTTATTAAATACTTGGGAACAGCATCACATGAAAGACCAGCATGATAAGATGGGCGGTGTTAATAGGTTTGGTTCAGGCCAGAAATGTGATAGGAATAATGCTCTGGGTACAATTGACTGGAAGCCCCTTAAATGGACCCGACCTGGATACTTATCATCACGAGAATCAGGCTTAAGCCACTCAATTAGCACGAGGAGCTTAGGAGGGACAAATTCAAAGAGAAGCTGTGAAGGGAAGGTTGGGTTGCACCACAAAATTGCAACTGGTGTTGAGTCAAATTCAGGGGAAGCTGCTAGGCTTCGTACGTCTTCTGCTCCATCTGAAGAGGCAAATTTGAGGAAGAAGCCTAGACTAAATTGGGGTGAGGGACTTGCAAAGTTTGAGAAAAAGAAAGTTGAGGGGCCTGAGGTAACTTTAAACAAAGATGATCCTGTTTCACCTTTTAATATGGAACCCAACAATTTCCTCAGTCCCGGCTTAGTAGATAAAAACGCAAAAGTTTCAGGATTTTCAGATTGTGCCTCTCCCGCAACTCCATCTTCTGCTGCCTGCAGCTCTTCACCAGGTACAGATGATAAATTGTTTGGAAATGCTGCAAATGTGGACAGTGATGTTAGTAACCTGCGTAGTTCACCTGGTCCTGGGGGGAAAAGTCATCTGCAGATGTTTTCTTTCAATTTAGAGAAAGTGGATATTGACTCATTGTCTAGTTTGGGCTCTTCACTTGTTGAGTTACCTCAGTCTGATGATCCTTGCTCTGTGGATGATAGTTTATTAAGATCCACCACAATGAATAAATTACTGACGTTAAAAGCTGGCATTTCAAAGGTATTAGAGGTGactgaaactgaaattgatttactcgaaactgaacttagatctctaaaatctgaatctgaGGGTAGATTTCCGTGTTCAGCAGCAGTTGGCTCTCTGATGTGTTACAACGTAAACTCTTGTGAGGAACATGTTGGAAGCACTGACAAGGTTGCTCGTCTAGAACCATTGCAAATTGTATCTTCTGATGAACCTATTGTGGAGATGGCTGTTGTGGAGAAGATGCCTCTTTCTACTAACTTGCTTGATATACATGATAATTGCCAGGAAGATGATAATGACTGTCATGGTGCTGCAAGGTCTGAACTTGTTGAGCCTCTGCCCATGATGAATGCAGTTTCTGCATGTGATGCGGGGTATGGTACATGCTCTGAAGACTTGGGTCGAATTCAATCAACGACCGTACAATGCTTAATTCCCTGTACTTATAGGCATGTTGCCGATGTCTCTGCTTGTGGTGATAGTAATTCATCTTTGGAGGTTAAAGATGGTGTGGATGATAAGTCAAGTGAAAGATTCTATTCCAGCACTGAGAATATTTTATATGATACAATTATTTCATGCAATAAAAAATCTGCAAAAGCAGCATGGGAAGAAATTGCTAAGTTATTGCCTGAAGAATGTGGCAAGAAGTTCTACGACAATATTGGAGTTAGAAGTGCCTCATGCTCTCAAAATGGTGTATTCATTATGGCAAAATTTGAGGAGAAACGGCGATTTACAAGACTGAAGGAGAGGGTTATAACGCTTAAGTTTAAAGCCTTGCATCATTTGTGGAAAGAAGATATGCGCTTGCTGTCTGTTCGTAAACACCGCCCAAAATCTCACAAGAAACTTGAATTAGATCTACGCACTACCAGTAATAGTCATCAGAAGAAGCGGTCTTCTATTCCCTTTCGTTTTCCTTTCCCTGCAGGAAACCAACTGAGATTGGTCCCAACATCTGAGATGATTAACTATACAAGCCAACTGCTTTCGGAATCCAAACATGAAATTCAAAGAAGCTTCTTGAAGATGCCAGCATTAATTTTGGATCAGAAGGACAAAATGAATTCAATGTTTTTATCAAGTAATGGGCTGGTTGAAGATCCATTGGCTATTGAGAAAGAAAGGGCCATGATAAACCCTTGGACTTCAGAAGAGAAAGAGATTTTCTTGGAGAAATACGTGGCGTTTGGAAAAGATTTTCGGAGAATTGCTTCTTTCCTAGACCACAAGACAACGGCTGACTGTGTTGAATTCTATTACAAAAACCATAAGTCTGATTTTTTTGTGAAAATTAAGAAAAAAAATGATGACAAGCTAGGTAAATTTTGTAAAACCAAAGCCGACTTGATGGCATCAGGTATAAAATGGGATTCAGAAGTGAATGCTTCTTCACTTGACATTTTGAGTGCAGCTTCAGTGATGGCAACCCGCATTGCAGGTAATCGGAAGATGCGTTCGGGAAGTTCCCTTTGGAGGGGATATGGTAATGTGGTCAATTCTAAGGGTGACAATATCATTACACAGAGGATGGACAGTGTTGACGTTCTTCAAGATGAAAGAGAGACTGTTGCAGCTGATGTATTGGCTAGTATATGTGGTTGTATTTCATCTGAGGCAACAAATTCCTGTATAACAAGTTCAGTTGATCCTGTGGAAGATAACAGGATCAGGAAGTGTGTGAAAGTGAGGTCTGTATGCAAACAAACTCCAATGGATGTTACTCAGAATATTGATCATGAAACTTGTTCCGATGAGAGCTGTGGTGAAATGGATCCTACTGATTGGACGGATGGGGAGAAGGCATCCTTCCTTCAGGCTGTATCATCTTTTGGAAAGGATTTTGCAATGATTGCACAGTGTGTCAGAACAAGATCCCAATACCAGTGCAAAGTTTTTTTTAGCAAGACTCAGAAACGTCTAAAATTAGATCTCATGGGTCCCAAACCTGAAAATGTTGGATCACTGGTGAATGATGATGTGGATGGTGGCAGGAGTGATGCAGATAATGCATGTGCTGGACAGACAGGTTCTGTCAATGGCACTGATACGTCAGGCACTAAAACAGATGTAAACCAGCCTGCATCAGACAAGAACATGTATCACGATGAATCCAATCCTGTAGAAGCTAGCAACCTGTCAGCTGAGTTAGATGAATCAGAGGAAACTAATGGGAAAGTAGATCATGAAGATGTAAATATGGTTTCTAATCCATGTGTTATTGGTGGTGAGTCGAAACTGGGAATTGATGGTGATGCAGTTGTCTTGAACAGTTCTGATAAGTCTGGTTCTGTCCGGGACCAGAGAGCCATAGTTCTGTCGGATAGCATAGAAATTGGAGAAGTTAAGACTAGTGAAGGGGAAGGTGCAGTTATAGAATTGGTGTCTGATATGGAGACAGTTTCGGATAGCACAGACATTAGAGAACCAAGTGAAGGGAAAGGTGGAGTTACAGAATTGGTGTCTGATATGAAGACAATTGAACCATGCCACTCTTATTCTGTTGCTGAGGGTAGACTGGTTTCTGATGTTTCTTCCAGGCATTGGGGAAATGAATTGGAGGGTTCAACTATATGTCTAGTTGACAGAGATGAAGCTAATACCGATGTTGTAATTGAGTTGAAAGACAACGTCCACGATTCAAGCACTCCGGTGAATACTTCACTATCATCTGTGGAAGTTTCTTGTTCAAGATTGGGTGTTGATGTTGAAAATGAGCCCCAACTACCCCTTGAAAAACCTCATTTCTCAGGATCGTCAGTGGGTCCTCTTACAAATGCAAATTCAATATTGCAATATACTGATGGTGCTGCTGTGCAATATAAGAAAACTGCTAGCCAAGATCTACTGTCTTGTGATATTCAGGGAAATCGAGATACGAGTGGTCATAATTCCAGTAGCAACCTTGGTTATCAGCTTTGTAATCCTGGGAATTTATTGGATGATGTTGAGCCTGCTAGAATCCTTCAATGCTATGATTTGCAAGTGTCTCCTAAGAAGGAAGTGAATGTGAATATGAGCTGCAGCAGTTCAGCAACCCAGTTAACGCTTTTGTCCCAAAAGATTGAACATGATGATCAATACAAAAGCTTGCAGTGTTTTTCAGATTCAGAAAAAACACCCAGAGATGGCGATGTGAAACTATTTGGGAAGATACTAACTATTCCTTCATCCACCCAGAAGCCTGTAAGTTCCAAGGGTAATGAAGAAAACTGTACCCACCGTCCAAAGTTAAGCAGTGCCTCTTCTAGTCTGAAACTAACCAGCCTTGATAATGCTGGTGGAAAATCAGCTATTTTGAAGGTTGAGCATGACGATTGCCGGGGCATTAAAAATGTTCCCGTTACGAGTTATCACGTCGAGAACAAAATACATCCCGATTGTTCATCACTGCCTGATTCTGCCATTTTGCTTGCGAAATATCCTGCAGCATTTAGTAGTTATTCCACATCTGCCATCTTAGAGAAAGAGTCATTACAGGCATTGGCCAAGAATGATAAACATCATCTGAATGGAGCATCTTCTTTTACAACTAGAGAAGTCAATGGATGCAATGGTGTGATTGATTACCAGATGTGTAGAGATAGCGATGATCAGAAAGAAGTGCTCTCTGACATGCAGAGAAGAAATGGTATCGAAGCAATCTCATCATGTTTACAGCGGCAGGGTAAGGGAATGGTTGGAACAAATGGTGTTGGGAAAGCAGACATTCTTGTTGGAGGATCCAAAAGTGTCATCGTCTCGGATCCTGAGTTTGTTGGTCAAACTGGGAGTGTAATGAAAGAGGATGATTTGGGTAGTTAG 5085 0.4142 MPLEPIPLDRKNSYRERKQGSSESLGSVARWRGSSSHHHQRRAADFRRFAGHHRKQGGWQLFPEESGHERMLSRSCDKMLEEDNCRPSVSRGDGKYGRGNKESKGAFSQREWRGRSWETTNSSLNTYRRQIDVNNDRRSVDDMLTYSSHPNSDLLNTWEQHHMKDQHDKMGGVNRFGSGQKCDRNNALGTIDWKPLKWTRPGYLSSRESGLSHSISTRSLGGTNSKRSCEGKVGLHHKIATGVESNSGEAARLRTSSAPSEEANLRKKPRLNWGEGLAKFEKKKVEGPEVTLNKDDPVSPFNMEPNNFLSPGLVDKNAKVSGFSDCASPATPSSAACSSSPGTDDKLFGNAANVDSDVSNLRSSPGPGGKSHLQMFSFNLEKVDIDSLSSLGSSLVELPQSDDPCSVDDSLLRSTTMNKLLTLKAGISKVLEVTETEIDLLETELRSLKSESEGRFPCSAAVGSLMCYNVNSCEEHVGSTDKVARLEPLQIVSSDEPIVEMAVVEKMPLSTNLLDIHDNCQEDDNDCHGAARSELVEPLPMMNAVSACDAGYGTCSEDLGRIQSTTVQCLIPCTYRHVADVSACGDSNSSLEVKDGVDDKSSERFYSSTENILYDTIISCNKKSAKAAWEEIAKLLPEECGKKFYDNIGVRSASCSQNGVFIMAKFEEKRRFTRLKERVITLKFKALHHLWKEDMRLLSVRKHRPKSHKKLELDLRTTSNSHQKKRSSIPFRFPFPAGNQLRLVPTSEMINYTSQLLSESKHEIQRSFLKMPALILDQKDKMNSMFLSSNGLVEDPLAIEKERAMINPWTSEEKEIFLEKYVAFGKDFRRIASFLDHKTTADCVEFYYKNHKSDFFVKIKKKNDDKLGKFCKTKADLMASGIKWDSEVNASSLDILSAASVMATRIAGNRKMRSGSSLWRGYGNVVNSKGDNIITQRMDSVDVLQDERETVAADVLASICGCISSEATNSCITSSVDPVEDNRIRKCVKVRSVCKQTPMDVTQNIDHETCSDESCGEMDPTDWTDGEKASFLQAVSSFGKDFAMIAQCVRTRSQYQCKVFFSKTQKRLKLDLMGPKPENVGSLVNDDVDGGRSDADNACAGQTGSVNGTDTSGTKTDVNQPASDKNMYHDESNPVEASNLSAELDESEETNGKVDHEDVNMVSNPCVIGGESKLGIDGDAVVLNSSDKSGSVRDQRAIVLSDSIEIGEVKTSEGEGAVIELVSDMETVSDSTDIREPSEGKGGVTELVSDMKTIEPCHSYSVAEGRLVSDVSSRHWGNELEGSTICLVDRDEANTDVVIELKDNVHDSSTPVNTSLSSVEVSCSRLGVDVENEPQLPLEKPHFSGSSVGPLTNANSILQYTDGAAVQYKKTASQDLLSCDIQGNRDTSGHNSSSNLGYQLCNPGNLLDDVEPARILQCYDLQVSPKKEVNVNMSCSSSATQLTLLSQKIEHDDQYKSLQCFSDSEKTPRDGDVKLFGKILTIPSSTQKPVSSKGNEENCTHRPKLSSASSSLKLTSLDNAGGKSAILKVEHDDCRGIKNVPVTSYHVENKIHPDCSSLPDSAILLAKYPAAFSSYSTSAILEKESLQALAKNDKHHLNGASSFTTREVNGCNGVIDYQMCRDSDDQKEVLSDMQRRNGIEAISSCLQRQGKGMVGTNGVGKADILVGGSKSVIVSDPEFVGQTGSVMKEDDLGS 1694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00580 1694 Coils Coil 431 451 - -
Car02g00580 1694 MobiDBLite consensus disorder prediction 207 229 - -
Car02g00580 1694 MobiDBLite consensus disorder prediction 1 42 - -
Car02g00580 1694 Gene3D - 953 1078 - -
Car02g00580 1694 SUPERFAMILY Homeodomain-like 1020 1069 IPR009057 -
Car02g00580 1694 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1677 - -
Car02g00580 1694 SUPERFAMILY Homeodomain-like 792 852 IPR009057 -
Car02g00580 1694 MobiDBLite consensus disorder prediction 207 226 - -
Car02g00580 1694 MobiDBLite consensus disorder prediction 245 265 - -
Car02g00580 1694 ProSiteProfiles SANT domain profile. 804 855 IPR017884 -
Car02g00580 1694 SMART sant 805 853 IPR001005 -
Car02g00580 1694 SMART sant 1019 1067 IPR001005 -
Car02g00580 1694 MobiDBLite consensus disorder prediction 19 33 - -
Car02g00580 1694 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1677 - -
Car02g00580 1694 CDD SANT 1023 1061 IPR001005 -
Car02g00580 1694 MobiDBLite consensus disorder prediction 1485 1511 - -
Car02g00580 1694 MobiDBLite consensus disorder prediction 84 107 - -
Car02g00580 1694 Gene3D - 785 856 - -
Car02g00580 1694 MobiDBLite consensus disorder prediction 1072 1152 - -
Car02g00580 1694 MobiDBLite consensus disorder prediction 1098 1140 - -
Car02g00580 1694 ProSiteProfiles SANT domain profile. 1021 1069 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00580 Car-Chr2 6932207 6943149 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car02g00580 Myb_DNA-binding 2.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00580 - - cam:101505283 3339.67