Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00576 ATGTTTATTCGTTTGTGTTTATTTGTATGTCTCTTTCTCATTCTGGGATTGAAAATAGAGCAAGTTAATGCTCAATTGTATAGGAGATATAGGAATAAACTATACCCTTATCGTACATTAGTTGTGGATTCATTAGGACAAGGAAATTTCTCTACTATACAATCTGCTATTGATTCAATCCCTTCCAACAATAATGTTTGGATTTGCATTAAGGTGAAGGAAGGTACCTACAGAGAAAAAATAGAGATTCCACGTGATAAGCCTTACATCATATTGAAAGGAGAAGGAAGGAGGAAATCATATGTTGAGTGGGATGATCATGATACAACAGCACAAAGTCCTACATTCGTAATAATGGCCGATAATATTGTTGTCAAATCCATTAGTTTTAGGAATTCATACAACAATCCGTTAAACAACAGACCGAAGAGACCTGCCGTAGCTGCAATGATAAGTGGCGACAAGGTCTATTTTTATAGAGTTGGTTTCTTTGGCTTTCAAGACACTTTGTGGGACGACAAAGGAAGACACTACTACGAGCTTTGCACCATACAAGGTGCTGTTGATTTTATCTTTGGAGCTGGCCAATCTTTGTTTGAGAGGTGTTCCATATCTGTTATTGGTGTTGGTTATATAACAGCACAAGGTAGAACAAATCCAAACGATGGAAGTGGATTTGTTTTCAAAGATTCACACGTGTTTGGAAATGGGACAGTTTACTTAGGAAGGCCTTGGAGAGGCTATGCTAGAGTGTTGTTTTACAATACCAATATGACCAACGTTGTACGACCTAGTGGTTGGAATTCATGGAACTTTGATAGTCGAGAGGATCATGTAACATTTGCAGAGCATGGGAATTTTGGACCTGGAGCTGACACATCCAAACGAGTGAAATGGGCTAAGAAATTGGATTTaaaaacagttgagaaaatggcaagtttgaacttcattgaccccaaacaagaacaatggcttcaaaatcaactcttctaa 993 0.3505 MFIRLCLFVCLFLILGLKIEQVNAQLYRRYRNKLYPYRTLVVDSLGQGNFSTIQSAIDSIPSNNNVWICIKVKEGTYREKIEIPRDKPYIILKGEGRRKSYVEWDDHDTTAQSPTFVIMADNIVVKSISFRNSYNNPLNNRPKRPAVAAMISGDKVYFYRVGFFGFQDTLWDDKGRHYYELCTIQGAVDFIFGAGQSLFERCSISVIGVGYITAQGRTNPNDGSGFVFKDSHVFGNGTVYLGRPWRGYARVLFYNTNMTNVVRPSGWNSWNFDSREDHVTFAEHGNFGPGADTSKRVKWAKKLDLKTVEKMASLNFIDPKQEQWLQNQLF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00576 330 Pfam Pectinesterase 40 317 IPR000070 GO:0030599|GO:0042545
Car02g00576 330 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 8 328 - -
Car02g00576 330 PANTHER PECTINESTERASE 10-RELATED 8 328 - -
Car02g00576 330 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
Car02g00576 330 SUPERFAMILY Pectin lyase-like 36 319 IPR011050 -
Car02g00576 330 Gene3D - 36 329 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00576 Car-Chr2 6890515 6893435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00576 38 276 Carbohydrate Esterase AT2G19150 45.344 1.76e-74 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00576 - - gmx:100819252 483.026