Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00573 ATGAATTCAGGAACGACAGGGTATAAACGACAGAGAAGGGCTGTGGAGAAAAAAATGTCAGTAAAAAAGCGTGAAATAAAGAACAGTTGTTATCCCAAAAACGCATTGGTAGTGGATGAGGTGACTGAGCCTAGGCGTTTGGTGCAACATTTACTTGAATCACTTTCCTTTCAAACTGTGGCTGCTTATAATTCTCATGAAGCTATACAAATTTTGTATAATTCTCGTATACAATTTGACTTTATATTTGTTGATTTTGATTTGTCCATAACCCCTGGACCTGAGCTGGTGAGGCGCATACGTGCGATGGGTATAAGGAGCAAGGTGGTGGGTATGTGCACAAATTACAGTGATGCTAATTGTCAAATGTTTCAAGAGGCAAGAGCTAATGCCACAGTTGCAAAACCTTTGAACCGACAAACTCTTGAAATTGTCACTGGAATCCTTGCCATCATATGA 459 0.3987 MNSGTTGYKRQRRAVEKKMSVKKREIKNSCYPKNALVVDEVTEPRRLVQHLLESLSFQTVAAYNSHEAIQILYNSRIQFDFIFVDFDLSITPGPELVRRIRAMGIRSKVVGMCTNYSDANCQMFQEARANATVAKPLNRQTLEIVTGILAII 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00573 152 Pfam Response regulator receiver domain 36 142 IPR001789 GO:0000160
Car02g00573 152 CDD REC 36 136 - -
Car02g00573 152 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 149 - -
Car02g00573 152 Gene3D - 9 148 - -
Car02g00573 152 ProSiteProfiles Response regulatory domain profile. 34 150 IPR001789 GO:0000160
Car02g00573 152 SUPERFAMILY CheY-like 32 143 IPR011006 -
Car02g00573 152 PANTHER HISTIDINE KINASE RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 2 149 - -
Car02g00573 152 SMART REC_2 33 148 IPR001789 GO:0000160
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00573 1 139 Response Regulator Gene Family AT3G04280 26.950 1.50e-09 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car02g00573 Response_reg 4.7e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00573 - K07315 cam:101509883 299.671