Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00561 ATGGATTTCAATGATGGCTATGTATCGAAAGAGCATCGTGAGCTTCATCAATCTGTATCAGAAAGTGCAGATTCAGTATCTATTTCTGCTTTGCAACTTTCACCTAAGTCACCAAAATCTCCTAAATCACCTAGGTCTCTAAAGGTGCAAGTCAAAGGAAGCAATTGGAGTCCAAAAAATAATAGGCAATCACATTCTCCAAAAGATGGACGTCCAAAGAAAGGTGGTTCTGGGGGTAAAGGCACCTGGGGTGGATTGCTTGATACAGATGACATGAATTCTCTTGACCCTAATGACCCAAATTATGACAGCACTGAGGAATGTGATGATTTAAATTCAAATGAAAAGAAAACGAATCCTGCATTGGAAGAGTACAAGAAAAAAGCTACAATAATAGTGGAAGAGTATTTTGCCACTGATGATGTTGTTTCAACAATGAATGAACTTAAAGAAGTTGGAAAACCAGAATACAGTTACTATTTTGTCAAAAAGCTTGTGTCTATGTCAATGGACAGACATGACAAAGAAAAAGAAATGGCTGCTATTCTTTTATCAGCACTTTATGCTGACATAATTCACCCTTCACAAGTTTACAAAGGTTTCACCAAATTAGTTGAATCAGCTGATGATTTGATTGTTGATATACCGGACACGGTCGACATTCTTGCGCTTTTCATAGCTAGAGCTGTGGTTGATGACATTCTTCCTCCAGCATTTTTGAAGAAACAGATAGCTAACTTACCAATAGATTCTAAAGGAGCTGAGGTCTTAAAGAAAGCTGATAAAAGCTATCTAACAGCTCCTTTGCACGCCGAAATCATCGAGCGGCGATGGGGAGGAAGTAAGAACACAACAGTTGATGATGTCAAAGCAAGGATAAACAACTTTTTGAAGGAATATGTAGTAAGTGGTGACAAGAAAGAAGCTTTTAGATGCATCAAAGACTTGAAAGTTCCTTTTTTCCATCATGAGATAGTGAAAAGGGCTCTTATTATGGCAATGGAAAAGCGTCAAGCAGAAACGCCTTTACTCGATCTATTGAAAGAAGCGGCAGGAGAAGGTTTCATCAACACAAGCCAAATGTCTAAAGGTTTCAGCAGGTTGATTGACCTTGTCGATGATTTATCACTTGACATACCAAATGCACATGGACTACTTCAAAAACTAATGTCGAAAGCAGCGTCCGAAGGTTGGTTATGTGTGTCATCATTGAAATCACTTACTATAGAGACTGAAAAGAACAACTCAATACAAGACAATGTTGCAAGAAGTTTCAAGACGAAGAGTCAATCCATCATTCAGGAATACTTTTTATCAGGCGATATTTTTGAAGTGAACAGTTGTCTAGAACAAGAGAACAAAAAAAACTGCGGCGAATTAAACGCGATCTTCGTTAAAAAGCTAATAACTCTTGCAATGGATAGAAAGAATAGAGAGAAAGAAATGGCTTCTGTGTTACTCTCATCTCTTTGTTTCCCACCTGACGATATTGTGAGTGGTTTTGTGATGCTCATAGAGTCAGCCGATGATACTGCCTTAGATAATCCTGTTGTTGTGGAAGATCTTGCTATGTTTCTAGCAAGATCAGTTGTTGATGAAGTGATAGCACCGCAACAGCTTGAAGAGATTGGAACACAATGTTTAGGACAAGATTCCATTGGGAGCAAAGTACTTCAAATGGCAAGGTCTTTGTTAAAGGCAAGATTAGCTGGTGAGAGAATCTTGAGGTGTTGGGGAGGGGGTGGAAGTAGCAAACCTGGTTGGGCTATTGAAGATGTTAAGGACATGATAGGTAAACTTTTGGAGGAATATGAGTCAGGTGGTGACATAAGAGAGGCTTGTAGGTGCATGAAAGAGTTAGGTATGCCATTTTTTCATCATGAAGTTGTTAAGAAAGCTTTGGTGATAATCATTGAAAAGAAGAATGAGAGAATGTGGGGTTTACTCAAAGAGTGTTTTGAATCAGGACTAATAACTATGAATCAAATGGTTAAAGGTTTTGAAAGAGTTGAAGAAGCTCTTGATGATTTGGCTTTGGATGTACCTGATGCTAAAAATCAGTTTTCATTTTATGTTGAAAGAGCTAAGAATGAAGGATGGTTGGATAGTTCATTTTGTTTCAGAAATGCAACAGAGAATGGCACATGCTAA 2151 0.3821 MDFNDGYVSKEHRELHQSVSESADSVSISALQLSPKSPKSPKSPRSLKVQVKGSNWSPKNNRQSHSPKDGRPKKGGSGGKGTWGGLLDTDDMNSLDPNDPNYDSTEECDDLNSNEKKTNPALEEYKKKATIIVEEYFATDDVVSTMNELKEVGKPEYSYYFVKKLVSMSMDRHDKEKEMAAILLSALYADIIHPSQVYKGFTKLVESADDLIVDIPDTVDILALFIARAVVDDILPPAFLKKQIANLPIDSKGAEVLKKADKSYLTAPLHAEIIERRWGGSKNTTVDDVKARINNFLKEYVVSGDKKEAFRCIKDLKVPFFHHEIVKRALIMAMEKRQAETPLLDLLKEAAGEGFINTSQMSKGFSRLIDLVDDLSLDIPNAHGLLQKLMSKAASEGWLCVSSLKSLTIETEKNNSIQDNVARSFKTKSQSIIQEYFLSGDIFEVNSCLEQENKKNCGELNAIFVKKLITLAMDRKNREKEMASVLLSSLCFPPDDIVSGFVMLIESADDTALDNPVVVEDLAMFLARSVVDEVIAPQQLEEIGTQCLGQDSIGSKVLQMARSLLKARLAGERILRCWGGGGSSKPGWAIEDVKDMIGKLLEEYESGGDIREACRCMKELGMPFFHHEVVKKALVIIIEKKNERMWGLLKECFESGLITMNQMVKGFERVEEALDDLALDVPDAKNQFSFYVERAKNEGWLDSSFCFRNATENGTC 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00561 716 SUPERFAMILY ARM repeat 285 406 IPR016024 -
Car02g00561 716 PANTHER PROGRAMMED CELL DEATH 4 1 711 IPR039778 GO:0045892
Car02g00561 716 MobiDBLite consensus disorder prediction 20 63 - -
Car02g00561 716 SMART ma3_7 125 236 IPR003891 -
Car02g00561 716 SMART ma3_7 425 536 IPR003891 -
Car02g00561 716 SMART ma3_7 593 702 IPR003891 -
Car02g00561 716 SMART ma3_7 289 400 IPR003891 -
Car02g00561 716 SUPERFAMILY ARM repeat 119 282 IPR016024 -
Car02g00561 716 MobiDBLite consensus disorder prediction 1 119 - -
Car02g00561 716 ProSiteProfiles MI domain profile. 124 245 IPR003891 -
Car02g00561 716 ProSiteProfiles MI domain profile. 288 409 IPR003891 -
Car02g00561 716 Pfam MA3 domain 594 702 IPR003891 -
Car02g00561 716 Pfam MA3 domain 126 236 IPR003891 -
Car02g00561 716 Pfam MA3 domain 290 399 IPR003891 -
Car02g00561 716 Pfam MA3 domain 425 535 IPR003891 -
Car02g00561 716 PANTHER MA3 DOMAIN-CONTAINING PROTEIN 1 711 - -
Car02g00561 716 MobiDBLite consensus disorder prediction 1 19 - -
Car02g00561 716 Gene3D - 111 265 - -
Car02g00561 716 Gene3D - 419 568 - -
Car02g00561 716 ProSiteProfiles MI domain profile. 424 545 IPR003891 -
Car02g00561 716 Coils Coil 667 687 - -
Car02g00561 716 SUPERFAMILY ARM repeat 423 582 IPR016024 -
Car02g00561 716 ProSiteProfiles MI domain profile. 592 711 IPR003891 -
Car02g00561 716 SUPERFAMILY ARM repeat 589 707 IPR016024 -
Car02g00561 716 Gene3D - 576 708 - -
Car02g00561 716 Gene3D - 275 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00561 Car-Chr2 6742407 6746653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00561 584 702 Eukaryotic Initiation Factors Gene Family AT5G57870 31.148 1.11e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00561 - - gmx:102668745 1115.14