Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00551 ATGATTAGAGGGGGGTGTAGCTTCGAAGAAAAGGATAGAATGGCACAAAATGTGGGCTACACAGCTGCAATTGTCTATGACAATGAAGATGGTGGCGTCCTGGTTGCAATGGCAGGAAATTCTAGTGGTATAAGAATACATGTTGTATTTGTATCAAAAGCTTCGGGTTTGGCTCCAGAAGGATCACAATTTGATGCTAATCATTATGACACTAAGATGAATGAACTGCTTGCCAGTGATGGGCAAGAATTCTTCACCTCATATGATGAAGTCCATGATAGCTTTGATGCAATGGGGCTGCAAGAAAACCTTCTGCAAGGCATATATGCTTACGGGCCTTCTGCAATCCAGCAAAGAGGAATTGTTCCTTTCTACAAAGGTCTGGATGTGATTCAACAGGCTCAGTCGGGAACTGGGAAGACAGCAACATTTTGTTGCAGCAGCTCGATTACGGATTGGTTCAGTGCTAGGCTTTGGTTTTGGCTCCTACGGGGGAGCTAG 501 0.4451 MIRGGCSFEEKDRMAQNVGYTAAIVYDNEDGGVLVAMAGNSSGIRIHVVFVSKASGLAPEGSQFDANHYDTKMNELLASDGQEFFTSYDEVHDSFDAMGLQENLLQGIYAYGPSAIQQRGIVPFYKGLDVIQQAQSGTGKTATFCCSSSITDWFSARLWFWLLRGS 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00551 166 Gene3D - 1 62 - -
Car02g00551 166 Gene3D - 63 148 IPR027417 -
Car02g00551 166 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 58 146 - -
Car02g00551 166 SUPERFAMILY PA domain 2 59 IPR046450 -
Car02g00551 166 PANTHER - 58 146 - -
Car02g00551 166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 146 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00551 Car-Chr2 6560415 6560915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00551 55 145 Eukaryotic Initiation Factors Gene Family AT3G13920 78.947 1.79e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00551 K03257 - cam:105852033 188.734