Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00532 ATGGTTAATGCAATAAAGGCAGCAATTGGAGATGCAGTATTGACATTCACATGGCTGTTTATATCATCCACACTTGGATTAGTCACAAATGAAATTATGAAATTTTTTGATCTTCAATTTGTGACATATAATGGTTTAAATTATCCTTTTATTATAATCACAATATTACTAATATTCATTACTATAATTACTTTCACTACAATTGGTAATGCTTTGGGTGGTGCAAGTTTCAATCCCACAGGCAATGCTTCTCTTTATGCAGCTGGTCTTGGTTCTGATACCCTTTTCTCTATGGCTCTTCGTTTCCCTGCTCAGGCATTAGGTGCAGTGGGTGGTGCTGTTGCAATTATGGAGGTGATTCCGCCGAAATATCGGCATATGATTGGAGGACCTGCTTTGAAGGTTGATTTGCATACTGGTGCTATTGCAGAAGGAGTATTGACATTTGTAATCACTTTTGCTGTTCTCTTCATCATGCTTCGGGGTCCTCGTAGTGAGTTGGTGAAGACTTTGTTGACGGCCATCTTGACCGTGGCTTTGATCATCGTCGGTTCTGCTTACACCGGACCATCCATGAATCCTGTCCTTGCATATGGTTGGGCATACTTAGACAATTGGCACAACACATGGGACCAATTATATGTTTATTGGATTTGTCCTTTCATTGGAGCAATACTTGCTGCTTGGCTGTTTCGTGTCGTCTTCCCGGCACCGGTGGTGGTGGTAAAACAAAAGAAAGCCTGA 744 0.4113 MVNAIKAAIGDAVLTFTWLFISSTLGLVTNEIMKFFDLQFVTYNGLNYPFIIITILLIFITIITFTTIGNALGGASFNPTGNASLYAAGLGSDTLFSMALRFPAQALGAVGGAVAIMEVIPPKYRHMIGGPALKVDLHTGAIAEGVLTFVITFAVLFIMLRGPRSELVKTLLTAILTVALIIVGSAYTGPSMNPVLAYGWAYLDNWHNTWDQLYVYWICPFIGAILAAWLFRVVFPAPVVVVKQKKA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00532 247 Gene3D Glycerol uptake facilitator protein. 1 243 IPR023271 -
Car02g00532 247 PANTHER AQUAPORIN SIP1-1 3 246 - -
Car02g00532 247 SUPERFAMILY Aquaporin-like 3 238 IPR023271 -
Car02g00532 247 Pfam Major intrinsic protein 3 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g00532 247 PANTHER AQUAPORIN SIP1-1 3 246 IPR044222 GO:0015250
Car02g00532 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g00532 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g00532 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g00532 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car02g00532 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00532 Car-Chr2 6361269 6365013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00532 2 247 Major Intrinsic Protein MIP AT5G18290 53.629 3.10e-82 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00532 K09875 - gmx:100788738 341.273