Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00529 ATGTCATGGAATTCTTCTCTTAATTTTGGGAATAAGAAATTTACAAAGTTTGAGTTGAAACCCTCAAGGAATGCTCTTGAAGAGTTTAGAACAATCCAATTTCACTCATCAACAAAGAATATGTACTACAATCATCACCAACAAGCAAGGAACATGCATGCTTTAAGGATGCAAATTCAAGGAGGAGGAAATGGAAGTGGAGATTCAGGACTTGTTCTTTCAACTGATGCTAAGCCTAGACTCAAATGGACAACTGATCTTCATGAACGTTTCATTGAAGCAGTCAATCAACTTGGAGGAGCAGATAAAGCAACACCAAAAACAGTATTGAAACTTATGGGGATTCCTGGACTTACATTATACCATTTAAAGAGTCACCTACAGAAGTACAGGATCAGTAAAACTATGAATGGACAAACTAATACTGGCAGCAGTAAAATTGCATTAACCACAGAAGTTTCAAGCAGAATGTCAGAAGCAAGTGGAATTCATATGAAACATTTAAGCATAGGACTCCAAACAAACAAAAATTCAGAAATAAATGAGGCATTCAATATGCAAATGGAAGTGCAAAGAAGACTACATGAGCAACTTGAGGTACAAAAACACTTACAACTAAGGATAGAGGCTCAAGGGAAGTATCTACAATCAGTACTTGAAAAAGCTAAGGAAACACTAGGAACACAAAATTTAGGTACTATGGGACTTGATGATGCAAAGGTTCAACTATCTAAATTTACATCAAGAGTATCCAATGAAAACCTTGATTCTAAATTTTTAGGATTAAAAGAATTGCATGTACATTGGCCTCAACAAACACGAGAGGATGAAACCATTGATTATTCAATGGGAAGTTTCTTAACCAATAGTGAGGACTCTCAAAGAGACCAAGAAATGCATAACAAGGGAATGAAATTGGGAGTTTCAAAAGAGTGTGTGGATGAACCTATGCCTTTAAAGAATGATTTTACATTGTGTGAAAAAGAGAAGGAGAATGTGATGTTTGTTTCCTCATCAAATCATAGAGTACTAAAGGATGGATTGACCACTAGCCTCTTATTAATGAATGTAGGAGGTGTTCATGAAAAAGAAAATATGTGGAAGAGAACTATTTCGAAGGAAGATTTAAAGGGTGAAGAATGGAAAAGAATAAACAATATTGAAACTAATGGAGTGCAACTTAAACTTAATAGTGACAAAATATCTCAAGATTATAGACTTGCTAATTTTGAAGTGAAATTAGACTTGAATTCCAATGATGCTTCTTCTCAATGCCAAAAATTTGACTTGAATGGTTTTAGCTGGAATTGCTAG 1314 0.347 MSWNSSLNFGNKKFTKFELKPSRNALEEFRTIQFHSSTKNMYYNHHQQARNMHALRMQIQGGGNGSGDSGLVLSTDAKPRLKWTTDLHERFIEAVNQLGGADKATPKTVLKLMGIPGLTLYHLKSHLQKYRISKTMNGQTNTGSSKIALTTEVSSRMSEASGIHMKHLSIGLQTNKNSEINEAFNMQMEVQRRLHEQLEVQKHLQLRIEAQGKYLQSVLEKAKETLGTQNLGTMGLDDAKVQLSKFTSRVSNENLDSKFLGLKELHVHWPQQTREDETIDYSMGSFLTNSEDSQRDQEMHNKGMKLGVSKECVDEPMPLKNDFTLCEKEKENVMFVSSSNHRVLKDGLTTSLLLMNVGGVHEKENMWKRTISKEDLKGEEWKRINNIETNGVQLKLNSDKISQDYRLANFEVKLDLNSNDASSQCQKFDLNGFSWNC 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00529 437 Gene3D - 77 135 - -
Car02g00529 437 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 135 IPR017930 -
Car02g00529 437 Pfam Myb-like DNA-binding domain 80 131 IPR001005 -
Car02g00529 437 SUPERFAMILY Homeodomain-like 77 133 IPR009057 -
Car02g00529 437 Pfam MYB-CC type transfactor, LHEQLE motif 179 224 IPR025756 -
Car02g00529 437 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 45 436 IPR044848 GO:0003700
Car02g00529 437 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 45 436 - -
Car02g00529 437 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 78 133 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00529 Car-Chr2 6312364 6316751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00529 110 436 G2-like Transcription Factor Family AT3G04030 43.567 4.88e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car02g00529 Myb_DNA-binding 1.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00529 - - mtr:MTR_6g032990 591.267