Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00527 ATGAGCAATATTGGTGTAGCATATGCTCTAAAATGGTCAGCTTGGGTTTTCTCACTTTATGCACCAATTTTTCTTGGTTTGATGAATGCTTTTGGCCCTTCACTAACTACAATTGCTTCACAAGAAATTGGTAGTAGCATCTCAAGAGAAGATGAAAATGAAGAGTTTGAACAAGAAAGAGGAAATGAACTTGTTCTTGGAAGAACAAGAACAAGGACTTCAACTTATATGATGCATCTCTTTAGAGGCCTTCAAGTTAGAATGGTTTCACAATCTCAAAACATAGAACACaataggaacaacaatgataataataataataatggtaacaataataatagtaTACTTGTTATTGATCCATTCAATGAAGGTGCATTAATTGTGAGAGGTCCTAATTTGAATCACACAAATAGGATTAATGAAAATACTAGTGTTGGATCTTTGAATGATTTTGTGGATGGGTCAGGATTTGATTTATTGTTACAACATTTGGCACAAATTAGTCCTAGTGGATATGCAAGTATTAACCCTCCAACAAAAAAGGAAGCAATTGAAGCAATGGAAAATGTGACTAATGATGAAAAATTGCAATGTACTATATGTTTGGAGGATGTTGAAATTGGAAGTGTAGCTAAAGAAATGCCATGCAAGCACAAATTTCATAGTGATTGCATTGTGTCATGGCTTAAACTCCATAGTTCTTGTCCAATTTGTAGGTTTCAAATGCCTTGTGAGGATTCAAATGTTTTGGCTAATTTGGAAAATGGAAATAGGGataatgatgataataataataatGAGGTTTTTAGAGGTAGAGGAGAAAGGGGTAGAAATGGAAGAAGGAATTGGTTTCCTGTGCTTCAATCATTTAATAATTTCCTTCCTTTTCCTTGA 894 0.3221 MSNIGVAYALKWSAWVFSLYAPIFLGLMNAFGPSLTTIASQEIGSSISREDENEEFEQERGNELVLGRTRTRTSTYMMHLFRGLQVRMVSQSQNIEHNRNNNDNNNNNGNNNNSILVIDPFNEGALIVRGPNLNHTNRINENTSVGSLNDFVDGSGFDLLLQHLAQISPSGYASINPPTKKEAIEAMENVTNDEKLQCTICLEDVEIGSVAKEMPCKHKFHSDCIVSWLKLHSSCPICRFQMPCEDSNVLANLENGNRDNDDNNNNEVFRGRGERGRNGRRNWFPVLQSFNNFLPFP 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00527 297 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 170 245 IPR013083 -
Car02g00527 297 SMART ring_2 198 238 IPR001841 -
Car02g00527 297 Pfam Ring finger domain 197 239 IPR001841 -
Car02g00527 297 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 13 296 - -
Car02g00527 297 MobiDBLite consensus disorder prediction 254 274 - -
Car02g00527 297 ProSiteProfiles Zinc finger RING-type profile. 198 239 IPR001841 -
Car02g00527 297 MobiDBLite consensus disorder prediction 260 274 - -
Car02g00527 297 SUPERFAMILY RING/U-box 185 244 - -
Car02g00527 297 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 13 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00527 Car-Chr2 6296977 6298010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00527 100 257 C3H Transcription Factor Family AT1G26800 30.189 3.59e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00527 K11982 - cam:101512035 511.916