Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00525 ATGGACAAAGCCAATGTTATCAAACGCCTAAGTATTGTGCTTACTAACCATGTAACTTGCTTGGATGGATTAGAAGGTTCATCTTTGGTTGTTATGGAAAGTGATCTTCATGACTTGATATCAAGAGCTAGAAGCTCTCTCGCCGTGCTTGTCGCGGTTTTTCCTTCAAAAGATAGTGATGGATTCATTGAGGAGAAGTTGAATGGAGACTTTCCTTCTTGGGTAACAAGTAAGGATAAGAAGCTTTTAGAATCTTCAATTGGAGACATAAAGGCAAATGTTGTGGTGGCTAAAGATGGAAGTGGCAAGTTTAAGACTGTGGCCGAAGCTGTTGCATCTACACCAGATGATGGTAATGGTATGGATGTAACAACAATCACAGGCAGCTTGAATTTCATTGATGGAGCAACCATTTCCAGTAGTGCAATTGTCGGTATGAATTTTGAATGA 450 0.4 MDKANVIKRLSIVLTNHVTCLDGLEGSSLVVMESDLHDLISRARSSLAVLVAVFPSKDSDGFIEEKLNGDFPSWVTSKDKKLLESSIGDIKANVVVAKDGSGKFKTVAEAVASTPDDGNGMDVTTITGSLNFIDGATISSSAIVGMNFE 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00525 149 Gene3D - 61 127 IPR012334 -
Car02g00525 149 PANTHER PECTINESTERASE 9 118 - -
Car02g00525 149 SUPERFAMILY Pectin lyase-like 91 145 IPR011050 -
Car02g00525 149 PANTHER PECTINESTERASE 9 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00525 Car-Chr2 6240069 6240518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00525 4 147 Carbohydrate Esterase AT1G11580 43.017 9.43e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00525 K01051 - gmx:100815836 168.318