Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00511 ATGGAAATTCAATTTGAGGAACCAAAGAAGAGTTTGAGACCAAAAAGTGACAACAAATTCAAAGGTAGAATCAAAAAATATGAAACAAAAAACAAGTTTGTTGGGGTGAGACAAAGACCATCAGGAAGGTATGTTGCTGAGATTAAGGACACAACACAAAACATAAGAATGTGGCTTGGAACATTTGAAACAGCTGAGGAAGCGGCTAGGGCTTACGACGAAGCCGCAACACTTCTTCGAGGTTCCAACACTCGCACCAACTTCGTCACGCGTGTTTCTTTAGATTCTCCTCTCGCTTCTCGGATTAAAAATCTTCTAAACAACCGAATAAAAGGTACCAAACCACAACAAGAACATATGAATGTCAAGAGCAAAACCATTGATCATGTCAACACGGTTAGTGATATTACTAATAGTACCACTAATCGTGTCAGCACGATCCATGATATGACTATTAGCAATAGTGCTAACAGTGTGAGCATCAATAGTACTATTGATGGTACTAGTGCTAGGAGTGTAACTAGCACTAATAGTCTTATTAGTACAAACTCAAGCAATAACAACGTCGATGAAAAGAGTGATTCAATTTCAAGTATTATGACAATAGAAAATAAAAGACTATTTGATGATGCATATAGGCCAGATTTGAGCAATTTCAATGAGTTAAGTTCCAAGTCCAATGTTTCATGTGGTTTTGATCCATTTTTTGATAATTTTATGTCAAACAATGATGGAATATTATGTGATTTGGTTGAGTTGGGAGATTCACAATTTGAAAGGATGAAAGTTGAAAGACAAATATCAGCTTCACTTTATGCAATTAATGGTGTGCATGAGTACATGGAAACTTTTCAAGATTGCAATGAAGCTCTATGGAATCTTCCACCCTTTTGCTCATTTTTATGTTAA 909 0.3597 MEIQFEEPKKSLRPKSDNKFKGRIKKYETKNKFVGVRQRPSGRYVAEIKDTTQNIRMWLGTFETAEEAARAYDEAATLLRGSNTRTNFVTRVSLDSPLASRIKNLLNNRIKGTKPQQEHMNVKSKTIDHVNTVSDITNSTTNRVSTIHDMTISNSANSVSINSTIDGTSARSVTSTNSLISTNSSNNNVDEKSDSISSIMTIENKRLFDDAYRPDLSNFNELSSKSNVSCGFDPFFDNFMSNNDGILCDLVELGDSQFERMKVERQISASLYAINGVHEYMETFQDCNEALWNLPPFCSFLC 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00511 302 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Car02g00511 302 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Car02g00511 302 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 14 289 - -
Car02g00511 302 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 14 289 - -
Car02g00511 302 SUPERFAMILY DNA-binding domain 32 90 IPR016177 GO:0003677
Car02g00511 302 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Car02g00511 302 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Car02g00511 302 Gene3D AP2/ERF domain 31 91 IPR036955 GO:0003700|GO:0006355
Car02g00511 302 CDD AP2 32 88 IPR001471 GO:0003700|GO:0006355
Car02g00511 302 Pfam AP2 domain 32 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00511 Car-Chr2 5992619 5993707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00511 19 107 AP2-EREBP Transcription Factor Family AT5G19790 70.787 7.68e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Car02g00511 AP2 3.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00511 K09286 - gmx:100782886 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01867 03 64780798 64781841 Car02g00511 02 5992619 5993707 PCT