Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00490 ATGGAAAATAAGCTTCATCCAAAAGTGCTTCTAGTTTTGTTGACACTTTTTCTATCAACCTCTGACACAAACCAACTTCAATCCTCTTCACACACTCACACCCTTCTAAGACTCAAACGTTTATTAAACTTTCCTTCAATCTTAAGCACATGGAATTCCAATACAGATTTTTGCAACACAGATTCAAAAGCTTCTCTCAATGTTGTATGCTATGAAAACAACATAACTCAACTACACATAGTTGGTGAAACAACAAAACCACAAATTCTTCCAAAAAACTTTTCAATAGATTCATTTTTCACAACCCTTTTAAGGCTTCCAAGTTTGAAAGTCCTCACACTAGTTTCCCTTGGCTTGTGGGGTCCACTACCTAGCAAAATTTCTAGTTTGTCATCACTAGAAATAGTTAACATTAGTTCAAATTTTCTATATGGTTCCATTCCTCAAGAACTTCCATTGCTTTCACATCTTCAAGCATTCATTCTTGATGACAATATCCTCGAAGGCAAGTTATCTGATTGGTTTGATTCGTTTCCGTCTTTAACTGTTTTGAGTTTGAAGCGAAATTTATTCAACGGTTCCCTTCCTGATTCATTAACTAGTTTGGAGAATCTGCGAGTTCTTTCGCTTTCCGGTAACCATTTTAATGGATCGGTACCAGATTTAAGCCGGTTGACTAATCTTCAAGTGTTGGAATTGGATGATAATTATTTTGGACCAAACTTTCCTAGAATTGGTAAAAAATTGGTTACTTTAGTCCTAAGAAACAACAAGTTTAGGTCTAGTATACCTAATGATTTGAGTTCATGTTATCAACTCGAGAGATTCGATATATCGGATAACACGTTCGTTGGACCGATACAATTAGCATCATTATTTTCAATTCCTTCAATTACTTATCTCAACATTTCAAGAAACAAATTATCAGGAATGATTTTTGAGAACATGACATGTAATTTTGGACTAGAAGCTGTTGATTTGTCTTCAAATCTTTTGACAGGAAACTTACCAAAATGTTTAGTTTCAAATTCCAATGATAGGAAATTCTTGTATGATGGAAATTGTTTAGAGGATCAAAATCAACATAAACAATCCTTTTGTCACACTGAAGCATTAGCTGTTGGAATAGTGCCTAATGAGAGAAAGAAGAACAAAGGACTTTCTAAACAAGTTCTTTGGTTTGGAATAGTTGGTGGAACTTTTGGAGGATTTGTGGTTTTGGCATTGATTTTTAGTGTTATTAGAAGAGTAAATGGAAAAGGCATGATGATGATGAATTCTGAAACAAAGTTAATATCAGAAAATGTAGCTTCTTCTGGATACACTTCTAAGTTAATCTCTGATGCAAGGTATGTATCTAAACCAATGAAGTTTGGAAGTGTTGGCCTGCCACCTTATAGAGCTTTCTCACTGGAAGAGATTTTGGCTGCTACTAACAACTTTGACACCACTTCTTTTATGGGTGAAGGTTCTCAAGGGCAGATGAACAGAGGTCAACTAAAGGATGGTTCACTTGTTGCCATTAGAAGTATAAAATTGACCAAAAACTACAGGAATCAAGATTTCATGCAGCACATAGAATTGATATCAAAATTCAGGCATCATCATTTAGTCAGTGTTCTTGGACATTGCTATGAACATTATCTAGATGATTCAAATGTTAGAAGAATATTTATTGTGTTTGAGTATGTACCTAATGGATCACTCAAGAGTTGGATCTCAGATAGACATTATAGAAAGTGTCTTAATTGGACTCAACGCATAGCAGCTGCTAATGGAGTGGCAAAGGGAATCCAATTTTTGCATACAGGGATTGTTCCTTGTGTATATTCAAACAATCTCAAAATTACAGATGTTTTATTGGACCAGAATTTTGTTGCAAAAATCAGTAGTTATAATATGCCTATGCTATCCAACATGGGAAAGGTTGGGCAAGTAAACCCTTCAAATCTATTCAAAAGTCCTAGCTTTAACAAAAGGTTGTGA 1986 0.3479 MENKLHPKVLLVLLTLFLSTSDTNQLQSSSHTHTLLRLKRLLNFPSILSTWNSNTDFCNTDSKASLNVVCYENNITQLHIVGETTKPQILPKNFSIDSFFTTLLRLPSLKVLTLVSLGLWGPLPSKISSLSSLEIVNISSNFLYGSIPQELPLLSHLQAFILDDNILEGKLSDWFDSFPSLTVLSLKRNLFNGSLPDSLTSLENLRVLSLSGNHFNGSVPDLSRLTNLQVLELDDNYFGPNFPRIGKKLVTLVLRNNKFRSSIPNDLSSCYQLERFDISDNTFVGPIQLASLFSIPSITYLNISRNKLSGMIFENMTCNFGLEAVDLSSNLLTGNLPKCLVSNSNDRKFLYDGNCLEDQNQHKQSFCHTEALAVGIVPNERKKNKGLSKQVLWFGIVGGTFGGFVVLALIFSVIRRVNGKGMMMMNSETKLISENVASSGYTSKLISDARYVSKPMKFGSVGLPPYRAFSLEEILAATNNFDTTSFMGEGSQGQMNRGQLKDGSLVAIRSIKLTKNYRNQDFMQHIELISKFRHHHLVSVLGHCYEHYLDDSNVRRIFIVFEYVPNGSLKSWISDRHYRKCLNWTQRIAAANGVAKGIQFLHTGIVPCVYSNNLKITDVLLDQNFVAKISSYNMPMLSNMGKVGQVNPSNLFKSPSFNKRL 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00490 661 Gene3D Ribonuclease Inhibitor 242 358 IPR032675 -
Car02g00490 661 Gene3D Transferase(Phosphotransferase) domain 1 564 649 - -
Car02g00490 661 Pfam Leucine rich repeat 155 215 IPR001611 GO:0005515
Car02g00490 661 SUPERFAMILY Protein kinase-like (PK-like) 461 637 IPR011009 -
Car02g00490 661 Gene3D Ribonuclease Inhibitor 151 241 IPR032675 -
Car02g00490 661 Pfam Protein tyrosine and serine/threonine kinase 486 634 IPR001245 GO:0004672|GO:0006468
Car02g00490 661 Gene3D Phosphorylase Kinase; domain 1 447 563 - -
Car02g00490 661 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 7 643 - -
Car02g00490 661 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 643 - -
Car02g00490 661 SUPERFAMILY L domain-like 30 356 - -
Car02g00490 661 Gene3D Ribonuclease Inhibitor 30 150 IPR032675 -
Car02g00490 661 ProSiteProfiles Protein kinase domain profile. 481 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00490 661 ProSiteProfiles Leucine-rich repeat profile. 204 226 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00490 Car-Chr2 5778058 5786201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00490 44 646 Miscellaneous Gene Families AT3G03770 59.046 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Car02g00490 PK_Tyr_Ser-Thr 9.3e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00490 - - gmx:100813207 900.582