Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00489 ATGGCTGATTCACAAGGTGATGGTACCTCGGGAGCTAGGCGTAGTAAAGGTGCCAATGCTACGAAGCGTGCTATGACGGGAGTAACACAAGAGACATTGGTGATAGCGCCGTGTGGGGCGTGCAAGTTCTTGAGGAGGAAGTGTAGTGGTGGATGCATTTTTGCACCCTACTTTGGTACGGACCAAGGTGCTGCTAGGTTTGCGGCTGTGCACAAGGTGTTTGGCGCTAGCAATGTGTCGAAACTCTTGAACAATATTCCGACTAACCACCGCCATGAAGCGGCGGCGACAATATCGTATGAGGCTCAAGCTAGGTTATCTGATCCGGTTTACGGCTGTGTGTCCACCATTCTTGCTTTGCAACAACAGGTGGCAGCAATGCAGGCAGAAGTCTCAATGATGCAAAATCAGCTGATGAATAGCAGATTTGCATATGCAAGTGCTCTTCAAACCACACACCAACAGCATCACCAAATGTTACAGCAACCAAACTTCAATGTATCAGTGCAACCAGCATACTCCAACAATTCATCTGCTTCTACCAACAACCTTATGAACATCAACAACTTCAACCCTGGTTTTGACCTCACAATGGAGACAGTACCTTCATCACACAGCTTAGAGCCTTTTCAAAACTCAAGGTTGTCTCATTATGAGGAAGATGATTGA 669 0.4694 MADSQGDGTSGARRSKGANATKRAMTGVTQETLVIAPCGACKFLRRKCSGGCIFAPYFGTDQGAARFAAVHKVFGASNVSKLLNNIPTNHRHEAAATISYEAQARLSDPVYGCVSTILALQQQVAAMQAEVSMMQNQLMNSRFAYASALQTTHQQHHQMLQQPNFNVSVQPAYSNNSSASTNNLMNINNFNPGFDLTMETVPSSHSLEPFQNSRLSHYEEDD 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00489 222 ProSiteProfiles LOB domain profile. 36 138 IPR004883 -
Car02g00489 222 PANTHER LOB DOMAIN CONTAINING PROTEIN 14 207 - -
Car02g00489 222 Pfam Lateral organ boundaries (LOB) domain 37 135 IPR004883 -
Car02g00489 222 MobiDBLite consensus disorder prediction 1 23 - -
Car02g00489 222 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 14 207 - -
Car02g00489 222 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00489 Car-Chr2 5773956 5775761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00489 2 222 AS2 family AT3G03760 52.966 8.02e-67 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car02g00489 LOB 7.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00489 - - aprc:113866578 284.263