Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00488 ATGAAGATCGAGAGAACGGAGTGTTTTCTGATAGAACACGGAGACCTAATCCTCCCATGGCTCACCCACCAACAACTCGCCAACATTTCCTTAACCTGCAAATCCCTTCACTATCTCACCCGAATCATCACTCGTAACCGCATCTCCGATGCTTCTAGAACCTTCGAGAGTTTCCCTATCCCATTCCTcaacaacaacaacaacaataacaCTTACTCTTACTTTCTCTATACTCCTTCAATCCTTTATAATAATAATATTCCTCGTTATCAACCTTGGGGTAATTCGGTAATTTCACCATCACCAGTTTGGAGGAATCATGATGAAACGGTGACTTTTGTTGATGTGGTGGGATGTGACTGCGGGGAGATATGTCGGGATGGGTGTGCGTGTTTGGGTTTTTTTGATGGGCTTGATGATATGGGCCGTGAGTGTGGGCCGGGCTGTTTTTGTGGAGGAGAGTGTGGGAATAGGGTGAGTCAGAATGGGGTTGCGGTTAGGGTTAAGATTGTGAGAGATGAGAGGAAAGGGTGGGGTTTGTTTGCTGATCAGTTTGTTGGTAAAGGAATGTTCTTGTTTCAATATGCAGGTGAGCTATTGACAACAAAGGAAGCTCAGAGGAGACAAAAACATTACGACGAACTGGCATCGTGTGATCGTTTCTCTTCCGCCCTTTTAGTCGTAAGGGAACATCTTCCATCTGGAAACGCATGTTTGAGATTGAACATAGACGCGACGAGAATAGGAAATGTTGCACGGTTTGTAAACCATTCATGTGATGGTGGTAATTTAAGCACAAAGCTAGTTAGAAGTACAGGATCTTTGTTCCCCCGCCTTTGTTTCTTTGCTTCGAAAGATATTCAAGAAGACGAAGAGCTTACTTTTAGCTATGGAGAAATCAGGAAAAGGTCTAATGGGTTGCCATGCTACTGCAACAGCCCTTCTTGCTTTGGAACATTGCCCTCAGAAGACACGTGA 978 0.4356 MKIERTECFLIEHGDLILPWLTHQQLANISLTCKSLHYLTRIITRNRISDASRTFESFPIPFLNNNNNNNTYSYFLYTPSILYNNNIPRYQPWGNSVISPSPVWRNHDETVTFVDVVGCDCGEICRDGCACLGFFDGLDDMGRECGPGCFCGGECGNRVSQNGVAVRVKIVRDERKGWGLFADQFVGKGMFLFQYAGELLTTKEAQRRQKHYDELASCDRFSSALLVVREHLPSGNACLRLNIDATRIGNVARFVNHSCDGGNLSTKLVRSTGSLFPRLCFFASKDIQEDEELTFSYGEIRKRSNGLPCYCNSPSCFGTLPSEDT 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00488 325 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 16 314 - -
Car02g00488 325 SMART set_7 166 304 IPR001214 GO:0005515
Car02g00488 325 ProSiteProfiles SET domain profile. 166 298 IPR001214 GO:0005515
Car02g00488 325 ProSiteProfiles Post-SET domain profile. 305 321 IPR003616 -
Car02g00488 325 SUPERFAMILY SET domain 57 318 IPR046341 -
Car02g00488 325 Gene3D SET domain 34 306 IPR046341 -
Car02g00488 325 Pfam SET domain 177 298 IPR001214 GO:0005515
Car02g00488 325 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 16 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00488 Car-Chr2 5770926 5773548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00488 144 320 C2H2 Transcription Factor Family AT2G23740 34.254 8.03e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car02g00488 SET 1.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00488 K11433 - gmx:100786871 430.254