Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00477 ATGAATTGTGAAACAAACAACAACATGTTTGTTAAAGATTCTAGTATCATGCTCTTTGGTAAGAAGAttccggtgccggaatatcatattccggcgacctctcaaaaGGGTTGTCAGATTCAGGCCAACTCTACACCTATGAATTCTTGCAGTAACACAAAGCATACAGGAGTTGAAATTTTCCACACAGAAAACTATGAGAAATCAAAAACTTCATCAAAAGTTAATAATTCCATCCCTTTGGAAGAAAAAAAGGAGACTAGCAACACTGATCAAGAAAAAGTCCTTAAAAAACCTGACAAGATTGTTCAATGTCCAAGATGCAACAGTTTCGACACGAAATTCTGTTATTTCAATAATTATAATGTCAATCAACCACGACATTTTTGTAGAAACTGTCATAGATATTGGACCGCCGGTGGAACAATGAGAAGTGTTCCTGTTGGTTCTGGAAGACGAAAGAACAAACACATAGCTTCTCAATATCGTCACATAATAGCAACTTCCAATGGAAATCCGATCGAGCGTTTAGATATCGAGAACACTTCTAGATATCAAAATGTCTCGACGGATAAAAGTATTGTCTTGAAATTTGGTCAATTTGGTCATGATACTTCTTTTCGCGAAGAGGAAGAGTCATCCTTATGTGTATCTTCGATATCGAATGGTTATACTCGAGGAAACGAATTATCCGAATCCGAATATAATAGATCAAATTCATTGCAGAGTTACCCTGCATCTCAATGGATGGTTCCATTGAATCAAAGTTGGAACAATGCTAGTTCCATTGCTCAATCTTCAATGCAGTGGTGTCACGCGCCGATGGTCGCAGTTAAGAACATTTTGACACCAAACATTCCATTGCAATTTGTTCATGGATCATATTGGCATGGAAATGGAACAGTTTCAATTAGTTCAAATGGTTGCATTTCACCTTCTTCAACTTCTAGTAACAGTTGTTGCTCAGGTAATGGTTCACCAATCCTTGAAAAAAAACCAGATACGCGTGTTTTTGTACCAACGACTCTTAGAATCAGTGATACAAATCTTGAATAG 1056 0.3542 MNCETNNNMFVKDSSIMLFGKKIPVPEYHIPATSQKGCQIQANSTPMNSCSNTKHTGVEIFHTENYEKSKTSSKVNNSIPLEEKKETSNTDQEKVLKKPDKIVQCPRCNSFDTKFCYFNNYNVNQPRHFCRNCHRYWTAGGTMRSVPVGSGRRKNKHIASQYRHIIATSNGNPIERLDIENTSRYQNVSTDKSIVLKFGQFGHDTSFREEEESSLCVSSISNGYTRGNELSESEYNRSNSLQSYPASQWMVPLNQSWNNASSIAQSSMQWCHAPMVAVKNILTPNIPLQFVHGSYWHGNGTVSISSNGCISPSSTSSNSCCSGNGSPILEKKPDTRVFVPTTLRISDTNLE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00477 351 Pfam Dof domain, zinc finger 100 157 IPR003851 GO:0003677|GO:0006355
Car02g00477 351 ProSitePatterns Zinc finger Dof-type signature. 105 141 IPR003851 GO:0003677|GO:0006355
Car02g00477 351 MobiDBLite consensus disorder prediction 79 95 - -
Car02g00477 351 ProSiteProfiles Zinc finger Dof-type profile. 103 157 IPR003851 GO:0003677|GO:0006355
Car02g00477 351 MobiDBLite consensus disorder prediction 67 95 - -
Car02g00477 351 PANTHER CYCLIC DOF FACTOR 3-LIKE 11 349 - -
Car02g00477 351 PANTHER CYCLIC DOF FACTOR 2 11 349 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00477 Car-Chr2 5602576 5604596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00477 11 172 C2C2-Dof Transcription Factor Family AT1G26790 47.458 2.44e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car02g00477 zf-Dof 3.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00477 - - cam:101489791 702.205