Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00475 ATGGTTAAGAAGATCATGAAGGAGGAGAATAATAATGTGATTATGAAAACAGATGAGGCTTATATGGTGATGGCCAAAACATGTGAATTGTTCATTAAGGATGTGACAAAGAGATCTTGGTTCAAAGTGGAACAAAGGAGAAATCTTGGAAATGGTGAAAATGATGCAATAATTGGTATAAAGGACACATTTGATGCTATAGTTGATATTGTTTGTGAGACTCAAGTGATGGATGAGAAAACCCAAGACTCTCCAAAAAAATATTATTGA 270 0.337 MVKKIMKEENNNVIMKTDEAYMVMAKTCELFIKDVTKRSWFKVEQRRNLGNGENDAIIGIKDTFDAIVDIVCETQVMDEKTQDSPKKYY 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00475 89 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 2 46 IPR003958 -
Car02g00475 89 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 2 81 - -
Car02g00475 89 Gene3D Histone, subunit A 1 72 IPR009072 GO:0046982
Car02g00475 89 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED 2 81 - -
Car02g00475 89 SUPERFAMILY Histone-fold 2 47 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00475 Car-Chr2 5587853 5589359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00475 2 81 CCAAT-HAP5 Transcription Factor Family AT3G48590 42.683 4.72e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00475 - K07882 egr:104441771 60.077