Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00474 ATGGAAGATcaacaacaacaacaacaaAATGTTCAATCTCAGATTTCCAATACCAATAATCCAAACACTGAAAAGAGTGAAAGTACTGTGAGGTCAAGATGGACACCAAAACCTGAACAAATCCTTATACTTGAATCCATCTTCAATAGTGGAATGGTTAATCCACCAAAAGATGAAACTGTTAGAATAAGAAAACTTCTTGAGAAATTTGGAAATGTTGGTGATGCTAATGTTTTTTATTGGTTTCAGAATCGTCGTTCTCGTTCTCGTCGCCGCCAAAGGCAGATGCAAGCTGCTGCTCAAATAAGCAGCAGCGGTGCAAATCCATACcaccaataccaaagcagcagcaacaccaacagTATTTCTCCATCTGTTGGTGCGTCTGCAATTGGTTTTGGTGGTTCATCTTTTACTATGAATTCTTCTTCTAGTAATTCGTCTTATAATAATAACAACTTTTCGGGTTCTTCATCGTCgtgtggtgttggtgttggtgctggtgttgctgAAGAAGGGTTTGGTGGTTTGTTCTTAGGTTCTTCTCAAATTAATTTCCCTGAAATTGATCAAACTTCTTCAGCTGCTTCTTCAGCTTTGTTTCCATCTGATCAGGCTTCAAATTTCAACTATCACTCAGGATTTGGGGGGAGTAATATTTCAGGTTTGATCACAGTTTTCATCAATGGAGTTGCAACAGAAGTTCCAAGGGGTATAATAGACATTAAAACAATGTTTGGTGAAGATGTAATGTTAGTTCATTCTTCTGGAGTTTCAGTTCCAACCAATGAGTTTGGTTTCTTGATGCAGAGCTTGCAGCATGGTGAAAGCTACTTTCTGGTTTCAAAGCAAAACCAAGTATGA 864 0.3403 MEDQQQQQQNVQSQISNTNNPNTEKSESTVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGNVGDANVFYWFQNRRSRSRRRQRQMQAAAQISSSGANPYHQYQSSSNTNSISPSVGASAIGFGGSSFTMNSSSSNSSYNNNNFSGSSSSCGVGVGAGVAEEGFGGLFLGSSQINFPEIDQTSSAASSALFPSDQASNFNYHSGFGGSNISGLITVFINGVATEVPRGIIDIKTMFGEDVMLVHSSGVSVPTNEFGFLMQSLQHGESYFLVSKQNQV 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00474 287 MobiDBLite consensus disorder prediction 94 121 - -
Car02g00474 287 Pfam Homeodomain 31 91 IPR001356 GO:0003677
Car02g00474 287 MobiDBLite consensus disorder prediction 90 121 - -
Car02g00474 287 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 284 IPR044558 GO:0003700|GO:0048830
Car02g00474 287 SMART HOX_1 29 96 IPR001356 GO:0003677
Car02g00474 287 ProSiteProfiles 'Homeobox' domain profile. 27 92 IPR001356 GO:0003677
Car02g00474 287 SUPERFAMILY Homeodomain-like 26 99 IPR009057 -
Car02g00474 287 CDD homeodomain 31 86 IPR001356 GO:0003677
Car02g00474 287 MobiDBLite consensus disorder prediction 1 34 - -
Car02g00474 287 Gene3D - 31 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00474 Car-Chr2 5566588 5570108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00474 7 287 Wox Gene Family AT3G03660 53.448 2.16e-71 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Car02g00474 Homeodomain 2.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00474 - - lang:109335690 277.715