Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00470 ATGGGAAGTAGAAAGGAAGAAGAGAAGATTGAGAAAGTTATTAGGGGTCTTATGAAGCTTCCTCCGAATCGAAGATGTATCAACTGTAATAGTTTGGGACCTCAGTATGTATGTACAACTTTTTGGACCTTCGCTTGCATTACTTGCAGTGGAATACATCGGGAGTTTACTCATCGTGTGAAGTCTGTGTCAATGGCGAAATTCACTTTGCAAGAAGTTGATGCTCTTCAAAACGGTGGTAATCAGCGTGCAAGGGATTTATATTTGAAAAATTGGGACTTCCAAAGACAGCGGTTGCCAGATAGCAGCAATGTTGAAAAAGTAAGGGAGTTCATAAGGAATGTCTATGTGGATAAAAGATATGCTGGAACCAAGTCGTCTGAAAGGCCGCCAAGAGATGCACAGAGCCCCACAATTCATGAAGAGGAGGTAAGGCGTGCCAGTTCTTATCATTCATATTCACAAAGTCCTCCATATGATAATCAATATGAGGATCGCCGCTATGGAAAGCAAGCAGCGGTTCTGACGAGAAAGCCTGGTTCAGATAAAGTCCGTTATGATGGGAAGATGTCTGGTATTATCTACAGTCCCGGTCGTTTCAGTGATCACACTTATGATGAGAGATTTGCAAATGAGGGATCTGGGCCCAGAAATTCTGACTTTTCCGTGTCTAGTGGTCATGAGCAATTCAAATCAGATGTTCAGTCTCCTAAGTTTTTTAAGGACATTGAGTGTAGCAGTCCATCTTATATGCTTCCTGGTTCTCGTTCAAGCGAAGATGTGTGGTCTCAAGCAAAAAATGCAGCTCTCGAATCTAATGCCGTTGCCAAGAGAGATGCAAATGGAATTCATCCTCTGCAGAGAACTACATCATTGCAACCAACAGATGGAAACTTTTCGACCTTAAAATCTTACAGTTCTGGTGGTTTAGTTGATTTTTTCTCAGAACATGTCCAATCTTCAGGGTCCCTTCAGGATAAAGCATTAGGAATTCCACTGCCATCTGGTCCTGCAAGATCTGTTAGCTTGGACCTTTCTAAGGCACCAGTCGCATCAGCTCGGTCTGCTGATCTTTTTCAAACAGCTGCACCATCTCAAGCACCATTGGGAGATCTGTTTCAATTATCTGATATGGCAGCAGTGCCATCTTTCAAGGGAAATCAACCTACGAAAACATCCCAATTCGCATCTATTGACTTCTTTGCGGATCTTCCTCAGCAGCCTTCTGCTTTAACCTCCGATGTAAAATCGGTGGAGTTATCCATTCCTAGAAATGAAGGGTGGGCAACATTTGATACGCCTCAATTCACAGCTTCTACTGCACAAGTGGAAATTCCTGTGGCAGTACCTTCAAGTGCTGAACCTTCGCAGGATAGATTTGATCCATTTTCAACCTTAAATGGAAATATGCAATGGCCATCTTTTGAAATTCCTAGTGCTGGTTTACCTTCTTCTGTTACATCAAATGTATGGCATGATGGTGTGTGGAATGGAGAAAAACAAGTTCCTGTTATGGCAACAGGCACTCAACCATGGAATGCATTTGAATATTCTGGTACCCATCTTCATGTGGATGGCAATAATCAAGGACAGTTGCAACATGTGCCATCAGAAATTTTGGATTTAAGTGCTTCTGAGGGATCCAATAAAGGCGAAATCCAAGGTGTTGCCACTATTGGAGGATTTGATAATCATGACATCCCATCAAATGGGGTTATTCAACCTAATGGAATCAATCGTAAATCAACTAATCCATTTGATTTTCCCTTTGATTCTGATGTAGATCAGAGCAATATGTTCCTTGATATGAGCTCATTGCAAGCTGCTCTGCCAGATGCTCTCTTGCCAGCTACATTTGGTGGTATCTCTGAACCCTGGCTCCCTCAAAATACAGTGACCCCATATATTTCCTCTGCAGGAGAAGGTGGTTTGTCATTCATGGCTGTGCAAACACCAAGTTCTCAATTACAGAATATCCAGGCACAGGAACCAGTTGCTTCATTTGGGGGAAATCCTTTTGCATAG 2025 0.4242 MGSRKEEEKIEKVIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFACITCSGIHREFTHRVKSVSMAKFTLQEVDALQNGGNQRARDLYLKNWDFQRQRLPDSSNVEKVREFIRNVYVDKRYAGTKSSERPPRDAQSPTIHEEEVRRASSYHSYSQSPPYDNQYEDRRYGKQAAVLTRKPGSDKVRYDGKMSGIIYSPGRFSDHTYDERFANEGSGPRNSDFSVSSGHEQFKSDVQSPKFFKDIECSSPSYMLPGSRSSEDVWSQAKNAALESNAVAKRDANGIHPLQRTTSLQPTDGNFSTLKSYSSGGLVDFFSEHVQSSGSLQDKALGIPLPSGPARSVSLDLSKAPVASARSADLFQTAAPSQAPLGDLFQLSDMAAVPSFKGNQPTKTSQFASIDFFADLPQQPSALTSDVKSVELSIPRNEGWATFDTPQFTASTAQVEIPVAVPSSAEPSQDRFDPFSTLNGNMQWPSFEIPSAGLPSSVTSNVWHDGVWNGEKQVPVMATGTQPWNAFEYSGTHLHVDGNNQGQLQHVPSEILDLSASEGSNKGEIQGVATIGGFDNHDIPSNGVIQPNGINRKSTNPFDFPFDSDVDQSNMFLDMSSLQAALPDALLPATFGGISEPWLPQNTVTPYISSAGEGGLSFMAVQTPSSQLQNIQAQEPVASFGGNPFA 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00470 674 MobiDBLite consensus disorder prediction 122 165 - -
Car02g00470 674 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Car02g00470 674 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Car02g00470 674 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Car02g00470 674 SUPERFAMILY ArfGap/RecO-like zinc finger 10 122 IPR037278 -
Car02g00470 674 Gene3D Arf GTPase activating protein 2 131 IPR038508 -
Car02g00470 674 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
Car02g00470 674 MobiDBLite consensus disorder prediction 134 148 - -
Car02g00470 674 SMART arf_gap_3 11 129 IPR001164 GO:0005096
Car02g00470 674 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD14-RELATED 1 674 - -
Car02g00470 674 Pfam Putative GTPase activating protein for Arf 12 122 IPR001164 GO:0005096
Car02g00470 674 PANTHER ARFGAP/RECO-RELATED 1 674 IPR044820 GO:0005096
Car02g00470 674 CDD ArfGap_AGFG 11 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00470 Car-Chr2 5525041 5532403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00470 14 137 C2H2 Transcription Factor Family AT3G07940 32.090 1.72e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00470 K15044 - gmx:100794964 946.806