Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00465 ATGGATCATTACAAAGTTCTAGGTTTACACAAAACAGCATCAAAGGAAGAAATTAAAGCAGCATTCAAAAAATTAGCGTTTCAATTTCATCCAGATAAGCATTCCCAATCACCGAAATCCGTTAAAGACAGCGCCACACTTCGATTCAAACAGGTTTCTGAAGCATACGAAGTTCTCATGGATGATCGGAAACGCGCCGATTATAATTACCGGTGGCGTTCCGGTCAACAAAGTGGTGGTGGTGGTAATGGAAAGTATTATTCTCAGTATGGTTATGGATACGGTAGAAGTGGGCGTAGCTATGAGTATAAAACTAGGTCGGGGTTtggtggcggtggtggtggtggtggtTTTGCGTCAAAGTTTGAACTTGCTTTCCGGATTTTGACGGCGAGATCTTCTCTTCTCAATCTTGGATTTGCAGCAGCTATATTAGGTGTGATGATTGTCATTGATACAAGTGGAGAATCCTTATGGAAGATGCAAAATTCTGGGAAATCTTTTGAAGAAGCCATGAATACCATTGAAAAAGCAAAAGCGTATAAAGAAGATAACATAAACGAACGTCCTTGA 573 0.3787 MDHYKVLGLHKTASKEEIKAAFKKLAFQFHPDKHSQSPKSVKDSATLRFKQVSEAYEVLMDDRKRADYNYRWRSGQQSGGGGNGKYYSQYGYGYGRSGRSYEYKTRSGFGGGGGGGGFASKFELAFRILTARSSLLNLGFAAAILGVMIVIDTSGESLWKMQNSGKSFEEAMNTIEKAKAYKEDNINERP 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00465 190 Pfam DnaJ domain 2 69 IPR001623 -
Car02g00465 190 SMART dnaj_3 1 64 IPR001623 -
Car02g00465 190 CDD DnaJ 2 61 IPR001623 -
Car02g00465 190 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Car02g00465 190 Gene3D DnaJ domain 1 126 IPR036869 -
Car02g00465 190 PRINTS DnaJ domain signature 4 22 IPR001623 -
Car02g00465 190 PRINTS DnaJ domain signature 22 37 IPR001623 -
Car02g00465 190 PRINTS DnaJ domain signature 44 64 IPR001623 -
Car02g00465 190 PRINTS DnaJ domain signature 64 83 IPR001623 -
Car02g00465 190 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Car02g00465 190 PANTHER CO-CHAPERONE PROTEIN DJLA 1 173 - -
Car02g00465 190 PANTHER CHAPERONE PROTEIN DNAJ 72 1 173 - -
Car02g00465 190 SUPERFAMILY Chaperone J-domain 1 98 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00465 Car-Chr2 5471057 5474812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00465 3 69 C2H2 Transcription Factor Family AT1G74250 41.791 2.35e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00465 - - gmx:100782769 267.7