Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00458 ATGGGGTCTCAAAATGGGGTAGTTCAAGAGTCAAAGACTTCACCTTTATCTAGGTCAGGATCTTTGTATAATCTAACCCTTGATGAAGTACAAAACCAGCTTGGAAATTTAGGGAAACCACTTGGAAGTATGAATCTTGATGAGCTTCTGAAGAGTGTTTGGAGTGTTGAAGCTGCTGAAGCTTCTGATTTTGATGCTAATAACATGCAACATAATCAACTTGGTTCTTTGAATTCACAAGGGAGTTTAACTTTATCTGGTGATCTTAGCAAGAAAACTGTTGATGAGGTGTGGAAAGATATGCAAGTAAAGAAGAGGAGTGTTAATAGGGATAGGAAAGTGCAGGAAAGAGTACCGACACTCGGAGAAATGACTTTGGAGGATTTCTTGGTGAAAGCTGGAGTTGTTGGTGAATCGTTTCATAATAACAAAGAAGGTGTTGATAATTCAAATGGTGATTCTCATTCTCAGCAAAATGTTTCACAACATGGTCATTGGATGCAATATCACCAGCTTGCTTCAGTGCAGCAACATGATAATCATCAGAACAATATGATGGGGGGTTTTGTGACTTTTCAGGTTGCAGGGAATCAAGTTTTGGATGCAGCCTTGTCACCGTCTTCTTTAATTgGTACATTATCAGATACACAAACGCTAGGTCGAAAGAGGGTTGCTTCCGGTATAGTGGTAGAGAAAACTGTGGAGAGGAGACAAAAGAGGATGATTAAAAATAGGGAATCTGCTGCTCGGTCACGGGCGAGAAGACAGGCTTACACACAAGAACTGGAACTTAAAGTTTCGCGTTTAGAAGAGGAAAATGAAAGGCTTAGAAGACAGAATGAGATGGAGAAGGAGGTGCTATGTGTGCCGCCACCCGAGCCTAAGAATCAGCTCCGCCGAACTAGTTCGGCATCCTTTTGA 921 0.4137 MGSQNGVVQESKTSPLSRSGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSVWSVEAAEASDFDANNMQHNQLGSLNSQGSLTLSGDLSKKTVDEVWKDMQVKKRSVNRDRKVQERVPTLGEMTLEDFLVKAGVVGESFHNNKEGVDNSNGDSHSQQNVSQHGHWMQYHQLASVQQHDNHQNNMMGGFVTFQVAGNQVLDAALSPSSLIGTLSDTQTLGRKRVASGIVVEKTVERRQKRMIKNRESAARSRARRQAYTQELELKVSRLEEENERLRRQNEMEKEVLCVPPPEPKNQLRRTSSASF 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00458 306 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 234 279 IPR004827 GO:0003700|GO:0006355
Car02g00458 306 SMART brlzneu 232 300 IPR004827 GO:0003700|GO:0006355
Car02g00458 306 MobiDBLite consensus disorder prediction 1 20 - -
Car02g00458 306 MobiDBLite consensus disorder prediction 282 306 - -
Car02g00458 306 MobiDBLite consensus disorder prediction 142 162 - -
Car02g00458 306 Pfam bZIP transcription factor 236 282 IPR004827 GO:0003700|GO:0006355
Car02g00458 306 SUPERFAMILY Leucine zipper domain 236 286 IPR046347 GO:0003700|GO:0006355
Car02g00458 306 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 239 254 IPR004827 GO:0003700|GO:0006355
Car02g00458 306 MobiDBLite consensus disorder prediction 143 162 - -
Car02g00458 306 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 304 IPR043452 GO:0003700|GO:0045893
Car02g00458 306 Coils Coil 255 286 - -
Car02g00458 306 Gene3D - 234 289 - -
Car02g00458 306 PANTHER BZIP TRANSCRIPTION FACTOR 2 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00458 Car-Chr2 5419324 5421883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00458 1 306 bZIP Transcription Factor Family AT3G56850 59.677 2.93e-112 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car02g00458 bZIP_1 1.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00458 K14432 - gmx:100170741 372.089