Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00448 atggatgtcggagatgctacctgggaagaggaactgctgctgaagagtcaattccctgatttgcgccttgaggacaaggctactgttgaagCTGTTGTTGGGGATAGGTTTATAGCTCAGGACATTGGGTTCAAAAATACAGCAGACCCAGAGAAACACCAGGCAGTTGCTCTCCGAGTCAGCGCAGATCAATCTGTCATCAACCGATGCCGAATTGACGCGTTTCAAGACACTCTCTTTGCAGACACCAACAGACAATTTTACCGTGATTCCTACATTACCGGTACAGTTGACTTTATCTTCGGGGACGCATCTGTTGTGTTCCAGATGAGTAAGCTCGTGGCCCAAAAGCCCATGAGCAACCAAAAAAACATGGTCACAACCCAAGATAGATATGATCCAAACCATAAGTCCGCAACTTCAATTCAACAATGTGACATTATACCAAGCTCAGACCTCCAACCCGTGGTGGGATCGATCAAAACATACCTAGGCCGTCCGTGGAAGAAATATTCAAGGACTGTTGTTCTACAATCCTCGATAGACAGCCACATCAACCCAACTGGATGGGCCGAGTGGAACGAGACGACTAAGGACTTTCTACAAACATTGTACTATGGGGAATACTTGAACAATGGACCAGGTGCTGATACCAGCAGGAGAGTGAATTGGCCTGGTTATCATGTCATCACAAGTGCAACAGAGGCTAGTAAGTTTACAGTAAAACAACTCAGTGAAGGTAATGTTTGGTTGAAGAACACGGGAGTGGATTTTATTGAAGGCCTGTAG 789 0.4018 MDVGDATWEEELLLKSQFPDLRLEDKATVEAVVGDRFIAQDIGFKNTADPEKHQAVALRVSADQSVINRCRIDAFQDTLFADTNRQFYRDSYITGTVDFIFGDASVVFQMSKLVAQKPMSNQKNMVTTQDRYDPNHKSATSIQQCDIIPSSDLQPVVGSIKTYLGRPWKKYSRTVVLQSSIDSHINPTGWAEWNETTKDFLQTLYYGEYLNNGPGADTSRRVNWPGYHVITSATEASKFTVKQLSEGNVWLKNTGVDFIEGL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00448 262 PANTHER PECTINESTERASE 26 260 - -
Car02g00448 262 SUPERFAMILY Pectin lyase-like 29 261 IPR011050 -
Car02g00448 262 Pfam Pectinesterase 27 247 IPR000070 GO:0030599|GO:0042545
Car02g00448 262 ProSitePatterns Pectinesterase signature 2. 93 102 IPR033131 -
Car02g00448 262 Gene3D - 9 262 IPR012334 -
Car02g00448 262 PANTHER PECTINESTERASE 26 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00448 Car-Chr2 5202231 5203432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00448 27 262 Carbohydrate Esterase AT1G11580 64.979 2.88e-104 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00448 K01051 - gmx:100815836 385.185