Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00447 ATGGACAAAGCCAATGTTATCAAACGCCGAGTTAATAGTCCTAAAGAGGAACTTGCTTTGAATGATTGTGAGCAACTAATGGACTTGTCAATGGATAGAGTTTGGAACTCAGTATTGACACTAACTAACAATAACATTGATTCAAAGCAAAATGCACACACATGGCTAAGTACTGTGTTTACTAACCATGTAACTTGCTTGGATGGATTAGAAGGTTCATCTTTGGTTGTTATGGAAAGTGATCTTCGTGACTTGATATCAAGAGCTAGAAGCTCTCTCGCCGTGCTTGTCGCGATTTTTCCTTCAAAAGATAGTGATGGATTCATTGAGGAGAAGTTGAATGGAGACTTTCCTTCTTGGGTAACAAGTAAGGATATGAAGCTTTTGGAATCTTCAATTGGAGACATAAAGACAAATGTTGTGGTGGCTAAAGATGGAAGTGGCAAATTTAAGACTGTGGCTGAAGCTGTTGCATCTGCACCAGATAATGGTAATACAAGGTATGTTATCTATGTGAAAAAAGGAATCTACAAAGAGAATGTAGAAATTGGAAAGAAAAAGAAGAATGTCATGCTTGTAGGTGATGGTATGGACGTAACAACATTCCTAGGCAGTTTGAATTTCATTGATGGAACAACCATTTACAGTAGTGCAACTGCGGTATGA 666 0.3799 MDKANVIKRRVNSPKEELALNDCEQLMDLSMDRVWNSVLTLTNNNIDSKQNAHTWLSTVFTNHVTCLDGLEGSSLVVMESDLRDLISRARSSLAVLVAIFPSKDSDGFIEEKLNGDFPSWVTSKDMKLLESSIGDIKTNVVVAKDGSGKFKTVAEAVASAPDNGNTRYVIYVKKGIYKENVEIGKKKKNVMLVGDGMDVTTFLGSLNFIDGTTIYSSATAV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00447 221 Gene3D - 133 221 IPR012334 -
Car02g00447 221 PANTHER PECTINESTERASE 5 219 - -
Car02g00447 221 CDD PMEI-like_4 4 99 - -
Car02g00447 221 SUPERFAMILY Pectin lyase-like 137 219 IPR011050 -
Car02g00447 221 Pfam Plant invertase/pectin methylesterase inhibitor 13 84 IPR006501 GO:0004857
Car02g00447 221 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 101 IPR035513 -
Car02g00447 221 ProSitePatterns Pectinesterase signature 1. 164 183 IPR018040 -
Car02g00447 221 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 9 89 IPR035513 -
Car02g00447 221 Pfam Pectinesterase 139 219 IPR000070 GO:0030599|GO:0042545
Car02g00447 221 PANTHER PECTINESTERASE 5 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00447 Car-Chr2 5196708 5197373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00447 10 219 Carbohydrate Esterase AT1G11580 52.995 4.98e-70 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00447 K01051 - gmx:100815836 305.449