Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00439 ATGGAGGAATCGAAAAAGTGTTGGAGAAAGGAAGTAGACGAGAATCTAAAGAGACTACACTCTCTCTTATTCGGCGCCGAACTCGCTCTCAAAAACCGCGATTTCTCTTCCGCTTACATTCTCTCTCTTCGTCTCATTGGTTTCCTTGAATCTCGTTCTCAATCCGAAATTGACGAAACCTTTCTTCAACACATTCGTCGTGAAGCCTTAACCTACCTTCACTCCGCAAGACAATCTCTCAATCCTCTCATCGATCGTCAAGCTTTTGAACAAGTAAAGAAGAAGTCTCCAGGATGTGTTTTTGGCACAACAGGAGATATTGACACCGACAAGATATGGAATTCTAAATACTTTCAAGCTCTTCTCAAGACATCTAAAGAAAAAGATGGCAATCAATGGGTTGATCAACTGGGGAAGCAAAACAGAAGAGCCAGTGAAGCATCAAAGGAATTGGGGCAAACGAAGATAACATCCATGTATGGGAAAAACAGCTTGAGAACTAGTAATGGTTCAAAAAGTTTTTTCAACTTGAAAAATAACAGTTCTGAGGACTGCATAATTATTGGAAGGCCTCAATCACATGCGAGCCATACAAAGGGTCCTGGTGTCTCTTCTGTTTTTGAAGTAGAAGGAGAAGAAAGAGCTTGTCGAAACACTTTTTCGACAAAACGTGCACACGTGGAACATACTAGTCCCAGAGTTGGTTATGTCAAGTCACCTTCAAGCAAGGAGGAAGTTAGTCACGATGTCGTTGGCAATGGGTTTGTTACGGCGAAAGTACAGTTGGAATTAGAAGCAAAGCAAAAGCGATGTTTAAATAGTTCACCCAGTGCATCTGTCTCACCACAATGTGATAACAATCCTGCCAACAGGCTATATGGTGGGAGATCATATGGTATTTCACGACGTGGCATCCGTGGTAATTTTGTCCCCCCTATTAAGTCCAATGGGAGCAATACTGGAAATATAAGTTCCCGAATGGCTGGCAAGTGTGATGATACTTTAGATGAGTCTACAAAGAAATGTTTGGAATTCCTGTGTGGTCCTGATGGCGAACTTCCTGAGAAATTAAGGAATTTAGAACCTCGCCTCATTGAACATGTTAGTAACGAGATAATGGATAAAGATCCCAATGTCCGTTGGGATGACATTGCTGGATTGGACCATGCCAAAGTATGTGTCACTGAAATGGTCATATACCCTCTGCAACGTCCTGACATATTTATGGGCTGCCGATCTCCTGGGAGAGGTCTGCTTCTTTTTGGTCCACCAGGAACTGGTAAAACAATGATTGGAAAAGCCATAGCTGGGGAGGCAAAGGCAACCTTCTTCTACATATCTGCCAGCTCGTTGACTAGCAAGTGGATTGGTGAAGGTGAGAAACTAGTGAGAGCTCTATTTGGAGTGGCCAGTTGTCGTCAGCCAGCAGTGATTTTTGTTGATGAAATAGATTCCCTCTTGTCTCAGCGTAAGTCAGATGGTGAACATGAATCCAGTAGACGGATGAAGACACAGTTTCTTATTGAAATGGAAGGCTTTGACGGGGGTAACGAGCAAATTCTGCTTATAGGGGCAACAAATCGTCCCCAAGAGCTTGATGAAGCAGCACGAAGGAGACTTACTAAAAGACTTTATATTCCCCTACCATCCTCAGAGGCAAGAGCTTGGATTGCACGTAGCCTTTTAGAGAAGGATGGATTATTCAAGCTATCAAATGAGGAAATGGATATTATATGCAACTTAACGGAAGGTTATTCGGGATCAGACATGAAAAACTTGGTGAAGGATGCTTCTATGGGTCCCCTAAGAGAGGCATTAAGACAAGGTATAGAAATTACCAAGTTGAAAAAGGAGGATATGAGGCCAGTAAATCTTCAGGACTTCAAGAATTCCCTGCAAGAGGTTAGGCCTTCTGTTTCACCTAATGAACTTGGCACTTATGAACAATGGAACAAGCAATTTGGAAGCTTAGCAATGTAG 1980 0.4258 MEESKKCWRKEVDENLKRLHSLLFGAELALKNRDFSSAYILSLRLIGFLESRSQSEIDETFLQHIRREALTYLHSARQSLNPLIDRQAFEQVKKKSPGCVFGTTGDIDTDKIWNSKYFQALLKTSKEKDGNQWVDQLGKQNRRASEASKELGQTKITSMYGKNSLRTSNGSKSFFNLKNNSSEDCIIIGRPQSHASHTKGPGVSSVFEVEGEERACRNTFSTKRAHVEHTSPRVGYVKSPSSKEEVSHDVVGNGFVTAKVQLELEAKQKRCLNSSPSASVSPQCDNNPANRLYGGRSYGISRRGIRGNFVPPIKSNGSNTGNISSRMAGKCDDTLDESTKKCLEFLCGPDGELPEKLRNLEPRLIEHVSNEIMDKDPNVRWDDIAGLDHAKVCVTEMVIYPLQRPDIFMGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRMKTQFLIEMEGFDGGNEQILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIARSLLEKDGLFKLSNEEMDIICNLTEGYSGSDMKNLVKDASMGPLREALRQGIEITKLKKEDMRPVNLQDFKNSLQEVRPSVSPNELGTYEQWNKQFGSLAM 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00439 659 Gene3D - 377 651 IPR027417 -
Car02g00439 659 Pfam Vps4 C terminal oligomerisation domain 621 655 IPR015415 -
Car02g00439 659 PANTHER FIDGETIN-LIKE PROTEIN 1 75 656 - -
Car02g00439 659 Pfam AAA+ lid domain 581 620 IPR041569 -
Car02g00439 659 Pfam ATPase family associated with various cellular activities (AAA) 418 548 IPR003959 GO:0005524|GO:0016887
Car02g00439 659 SMART AAA_5 414 550 IPR003593 -
Car02g00439 659 ProSitePatterns AAA-protein family signature. 520 539 IPR003960 GO:0005524|GO:0016887
Car02g00439 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 377 654 IPR027417 -
Car02g00439 659 CDD AAA 411 548 - -
Car02g00439 659 PANTHER AAA DOMAIN-CONTAINING 75 656 - -
Car02g00439 659 Gene3D - 549 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00439 Car-Chr2 4973984 4982183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00439 355 658 Calmodulin-binding Proteins AT3G56690 31.935 9.70e-41 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00439 K22766 - gmx:100789161 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00439 02 4973984 4982183 Car02g00439 02 4973984 4982183 ECH