Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00425 ATGGATGCTGGGTTTGCAAAAGAGAATCCTTTATCTATGTCATCCATTATCACAAAGAATGATGGTTCTGGTTCTACGAGCAGCAAATCCTTAAGAGCCCTTGCATTAATTGGAGCTGGTTTCTCAGGGTTGTTGGGTTTTGCAACAACAGCATCAGCTGATGAAGCTGAGCATGGGCTTGCTTCTCCAAGCTATCCGTGGCCTCACGAGGGCATCCTCAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATACACAAGTCTGTGCTTCCTGTCATTCTATGTCTTTGATATCATACCGTGATTTGGTTGGAGTTGCTTATACTGAACAAGAAGTAAAGGCAATGGCTGCTGAAATTGAGGTGGTTGATGGCCCTAATGACGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGTGATCGTTTTCCTCAGCCATATGCAAATGAAGCAGCTGCTAGATTTGCTAATGGAGGGGCCTATCCTCCAGATCTAAGTCTTATAACCAAAGCTCGTCACAATGGTCAGAACTATGTGTTTGCTCTTCTTACTGGTTATCGTGACCCCCCTGCTGGTGTTGTGATTAGAGAAGGACTGCACTATAATCCCTATTTTCCTGGTGGAGCCATTGCCATGCCTAAAATGCTTAATGATGGTGCTGTTGAATATGAAGATGGTGTCCCTGCTTCAGAATCTCAGATGGGTAAAGATGTTGTGTCATTTTTGTCTTGGGCTGCAGAACCTGAGATGGAAGAAAGAAAACTGATGGGATTTAAATGGATATTTGTACTATCATTAGCATTACTTCAAGCTGCCTATTATCGCCGCCTTCGGTGGTCTACTCTTAAGTCTCGCAAGTTGGTTCTCGATGTTGTCAACTAG 891 0.4388 MDAGFAKENPLSMSSIITKNDGSGSTSSKSLRALALIGAGFSGLLGFATTASADEAEHGLASPSYPWPHEGILSSYDHASIRRGHQVYTQVCASCHSMSLISYRDLVGVAYTEQEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVVIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGVPASESQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSTLKSRKLVLDVVN 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00425 296 PANTHER CYTOCHROME C1 16 296 IPR002326 GO:0009055|GO:0020037
Car02g00425 296 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 251 295 IPR021157 -
Car02g00425 296 PRINTS Cytochrome C1 signature 65 84 IPR002326 GO:0009055|GO:0020037
Car02g00425 296 PRINTS Cytochrome C1 signature 85 104 IPR002326 GO:0009055|GO:0020037
Car02g00425 296 PRINTS Cytochrome C1 signature 130 150 IPR002326 GO:0009055|GO:0020037
Car02g00425 296 PRINTS Cytochrome C1 signature 163 187 IPR002326 GO:0009055|GO:0020037
Car02g00425 296 PRINTS Cytochrome C1 signature 201 212 IPR002326 GO:0009055|GO:0020037
Car02g00425 296 PRINTS Cytochrome C1 signature 212 231 IPR002326 GO:0009055|GO:0020037
Car02g00425 296 PRINTS Cytochrome C1 signature 232 251 IPR002326 GO:0009055|GO:0020037
Car02g00425 296 PRINTS Cytochrome C1 signature 251 266 IPR002326 GO:0009055|GO:0020037
Car02g00425 296 Pfam Cytochrome C1 family 67 284 IPR002326 GO:0009055|GO:0020037
Car02g00425 296 SUPERFAMILY Cytochrome c 60 250 IPR036909 GO:0009055|GO:0020037
Car02g00425 296 Gene3D - 56 251 IPR036909 GO:0009055|GO:0020037
Car02g00425 296 Gene3D - 252 295 - -
Car02g00425 296 ProSiteProfiles Cytochrome c family profile. 79 186 IPR009056 GO:0009055|GO:0020037
Car02g00425 296 PANTHER CYTOCHROME C1-1, HEME PROTEIN, MITOCHONDRIAL 16 296 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00425 28 296 Chloroplast and Mitochondria Gene Families AT3G27240 89.963 1.33e-170 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00425 K00413 - gmx:100803087 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00425 02 4756589 4759726 Car02g00425 02 4756589 4759726 ECH