Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00419 ATGGTAGTCGATCCTTCATTCACATCAAAAAGGAGAAGAGTCACCAACAATCGTTATTCTATGGAAACAATAGCAAAGATGCATGAACAATTTGGACGAGAGATTCGTGTTTTTGAAACATTATCACTTTCTTCATCACTAAATGCTGCAACTAACAAAGAAGAGGAGACTGATGAGTTCTACGAGTTTACTGCTGAAGATTATTACAAAATTTTGGCTACTAAAAAGCCAGATAAATTCTTGAAGACTCGAAAACTCCGAGAAGCTGAGGAGGCAGCTCGCAGGTCAAGAATAACCAAATCTGTGATTAGAGTTCGCTTTCCTGATAATCACACGTTGGAAGCTACCTTTCACCCATCAGAAACCATCCAGAGTTTAATCGATGTCCTTAATAAAGTGATTGCGCAACCAGAGAAGCCGTTTTGTTTATATACTACTCCTCCCAAGAAGCTGATCAAAGACTTCTCTCAAGACTTCTATACCGCTGGATTCTGTCCTGGTGCCATTGTGTACTTTTCATACGATGTTTCAAAAGGTGATAACAACCATGATGGCCCTTACCTACTAGAAGAGGTCATGTCCTTGAAGGGTTTGGATGTTGCTAATGATAAAGGTCAGCCGTCCGATCCTGTACAATCGGCACAGGTGCCTGCTGAGCCTGCCACGCAATCTCCTGCTGTTGAAGAACGAAAACCAGCCGAGAAAAAGCTTGTTAAGCCAAAGTGGCTGAAAATGTGA 738 0.4173 MVVDPSFTSKRRRVTNNRYSMETIAKMHEQFGREIRVFETLSLSSSLNAATNKEEETDEFYEFTAEDYYKILATKKPDKFLKTRKLREAEEAARRSRITKSVIRVRFPDNHTLEATFHPSETIQSLIDVLNKVIAQPEKPFCLYTTPPKKLIKDFSQDFYTAGFCPGAIVYFSYDVSKGDNNHDGPYLLEEVMSLKGLDVANDKGQPSDPVQSAQVPAEPATQSPAVEERKPAEKKLVKPKWLKM 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00419 245 MobiDBLite consensus disorder prediction 200 245 - -
Car02g00419 245 Gene3D - 90 172 - -
Car02g00419 245 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1-RELATED 4 245 - -
Car02g00419 245 MobiDBLite consensus disorder prediction 206 220 - -
Car02g00419 245 SUPERFAMILY Ubiquitin-like 77 172 IPR029071 -
Car02g00419 245 Pfam UBX domain 99 166 IPR001012 GO:0005515
Car02g00419 245 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 4 245 IPR044232 GO:0032984|GO:0051117
Car02g00419 245 MobiDBLite consensus disorder prediction 228 245 - -
Car02g00419 245 ProSiteProfiles UBX domain profile. 96 172 IPR001012 GO:0005515
Car02g00419 245 CDD UBX2_UBXN9 102 174 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00419 21 129 C2H2 Transcription Factor Family AT2G01650 35.398 6.29e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00419 K15627 - gmx:100818386 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00419 02 4629208 4633136 Car02g00419 02 4629208 4633136 ECH