Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00391 ATGAACAATTCTGAAAAAGAGAATTCATTGGCACTGAATGTCAATATTAAGAACAAGATTTCTGTCCAATCTAATGGATCTAAAGCTCCACCATCTCCTAAGCAACCTTTCTTCATTGGTGTTGCTGGTGGAACTGCATCTGGAAAAACAACCGTGTGTAACAGAATAAATAGTCAGTTTCGTGATCAACGTATTGTTATCATTAATCAAGACTCATTTTACCACTCATTGAGTGACAAAATATTACAAAAAGTTAATGATTACAACTTTGATCATCCTGATGCATTTGATACAGAGCTTATGCTTTCAAGTGTGGAGAAATTAAAACATGGACAAGTTGTTACCTTACCAAATTATGATATCAATAGCCATAAGAGAATTGAACCTCCACGCCAGGTTCACCCTGCAGATATCATAATTTTAGAAGGAATACTAATTCTTCATGATTCTCGTGTCCGAGATCTTTTGAACATGAAGATCTTTGTTGATGAAGATTCTGATGTGTGCCTTTCACGAAGGATTGAACGTCTTGCCATTGAACGTGGAAGGAACATTCAAAATGTTCTAGACCAATATTCCAGATTTGTAAAGCCTGGTTTTGAAGATTTTGTACTTCCTACAAAAAAATATGCTGATATTATCATCCCTGGTGGAGGAGATAATGATGTTGCCATTGACTTGATTGTTCAAAATATTCGTACAAAGTTTGGCCAACATGATCTTTGTAAAATATATCCAAATATTTTTGTCATTTTTTCAACATTTCAGATAAAGGGAATGCATACACTAATCCGTGATGTCAGAACAACAAAGCATGATTTTGTTTTTTATTCGGACCGTCTTATTAGACTGGTTGTTGAACATGGACTTGGTCACCTTCCTTTTACAGAAAAACAAGTCACAACACCAACAGGATCTGTATACTCTGGTGTAGTTTTCTGTAGCAGGCTATGTGGAGTATCAATTATTAGAAGTGGAGAAAGCATGGAAAATGCATTGAGAGCATGTTGTAAAGGAATCAAAATTGGTAAAATCCTTATTCATGGACATGGTACAAATGGCAGACAGTTAATCTATGAGAAGCTACCATCTGATATTGCAAGTCGACATGTGCTGCTACTTGATCCTGTTCTTGCCACAGGAAATTCTGCAGTGAAAGCTATCTCTCTACTACTCAAAAAGGGTGTATCAGAAGCCAACATCATTTTTCTAAACTTAATAGCAGCACCACAAGGAATAAATGCAGTTTGTGAAAGATTTCCAATGCTAAAACTTGTTACATCTGAGATTGATGCATCACTAAACGAGGATTCTCGTGTCATCCCCGGATTGGGGGAGTTTGGCGATCGTTACTTTGCCACTGATGATTAG 1371 0.3654 MNNSEKENSLALNVNIKNKISVQSNGSKAPPSPKQPFFIGVAGGTASGKTTVCNRINSQFRDQRIVIINQDSFYHSLSDKILQKVNDYNFDHPDAFDTELMLSSVEKLKHGQVVTLPNYDINSHKRIEPPRQVHPADIIILEGILILHDSRVRDLLNMKIFVDEDSDVCLSRRIERLAIERGRNIQNVLDQYSRFVKPGFEDFVLPTKKYADIIIPGGGDNDVAIDLIVQNIRTKFGQHDLCKIYPNIFVIFSTFQIKGMHTLIRDVRTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVTTPTGSVYSGVVFCSRLCGVSIIRSGESMENALRACCKGIKIGKILIHGHGTNGRQLIYEKLPSDIASRHVLLLDPVLATGNSAVKAISLLLKKGVSEANIIFLNLIAAPQGINAVCERFPMLKLVTSEIDASLNEDSRVIPGLGEFGDRYFATDD 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00391 456 Pfam Phosphoribulokinase / Uridine kinase family 38 224 IPR006083 GO:0005524|GO:0016301
Car02g00391 456 CDD UMPK 38 235 IPR000764 -
Car02g00391 456 Gene3D - 34 245 IPR027417 -
Car02g00391 456 Gene3D - 246 455 IPR029057 -
Car02g00391 456 Pfam Uracil phosphoribosyltransferase 253 454 - -
Car02g00391 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 228 IPR027417 -
Car02g00391 456 SUPERFAMILY PRTase-like 238 454 IPR029057 -
Car02g00391 456 PRINTS Uridine kinase signature 36 53 - -
Car02g00391 456 PRINTS Uridine kinase signature 66 77 - -
Car02g00391 456 PRINTS Uridine kinase signature 111 126 - -
Car02g00391 456 PRINTS Uridine kinase signature 167 177 - -
Car02g00391 456 PRINTS Uridine kinase signature 181 192 - -
Car02g00391 456 PRINTS Uridine kinase signature 203 216 - -
Car02g00391 456 PANTHER URIDINE KINASE-LIKE PROTEIN 5 16 452 - -
Car02g00391 456 PANTHER URIDINE KINASE 16 452 - -
Car02g00391 456 CDD PRTases_typeI 317 427 IPR000836 -
Car02g00391 456 TIGRFAM udk: uridine kinase 37 236 IPR000764 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00391 Car-Chr2 4374002 4378413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00391 35 456 PRT Gene Family AT1G55810 73.759 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00391 K00876 - gmx:100803453 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00391 02 4374002 4378413 Car02g00391 02 4374002 4378413 ECH