Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00358 ATGGAACTCGATTTAGTTTCTACACCACAAATGAATGAGATTGATGTTGTTGATGGTAGTGGACAGCAAGTGAGTCGTAATAATTCGCGTGGAATTCGTGTTGTTGGAAGCAGAATCTATGATTCTGAAAATGGAAAATCTTGTCACCAGTGCCGACAAAAAACAAGGGATTTTACTGCTGTATGTAAAAATCCTAGAAATGGAAAGCCTTGTGCGATTAGATTTTGTCACAAATGCCTTTTAAACAGGTATGGGGAGAAGGCAGAAGAAGTAGATCGGTTGGATGATTGGATGTGTCCGAAGTGCAGAGGCATTTGTAACTGTAGTTTGTGCATGAAGAAAAGAGGTCAACAACCGACTGGTTTACTAATTCGTACAGCCAAGGCGTCTGGATTTAAGTCTGTGTCAGAAATGTTAAACAATAAGGCTTCTCAAGATTCGGAATCAAATGAGGTTAATATGGATGCTGTTTTGCCTACAAATGAAGCTACTTTGGTAAAGGAGCTTGCAGTGGATCTGTTTGGGGAACTTGGGAAAGAAAATTCCATAGATGAAAAGAAAGGATTAAAGGTTGAAAATGGAAAAACAAAGAAAATGAAGCGGGAAAAGTTAAAGGAAATATCTAATGGTGGCAGTGTTGACGGTGCTTGTCAACAAAATAAGAAATTGAAAAAGCCTAAACTTTGTAATGGAGTTTCAGATGGAGGAGTTAAAAGAAATGCAAATGATGAAATGGAAACAAAAGTAAAGGAAAATCATGCTATGGTTCATAGTCAGATAGATGGTCCTCTGACTTGCCAAACCAGTGATGTGATGGATCATAGTGACAATGCTGGTGCTATAAACCAAGTGGCAAAAGATATTGTGGAAATAATTCCTTTGCCCACTGGCTCTGAGATAACCAAAATATCGGACATTGAGTTTTCACCTGAAGATGTTGGAAATGCACTGCAATTTTTAGAATTCTGTAGAGTGTTCGGAAAGGCTCTTGATATGAAGAAAGGAGAAGGTGAAGCAATTTTACGAGCCTTAATACGTAAGCTAACTTTGCGCCGTGGAGAAAAAACCTTGGTGGTTGAGTTCCAAATAAAATTGTTGACTTTGATAATATCTGATTCAGGAATTAGGTATCCATCCTTAACTGCAAGCAACGGAAAAAAATCATGGTTAAAAGCTTTGGAGGATTTAATTACTGAATCAGATATTGTATTGAAAGAATTTCCATTAGATTTGCTTAACAAAGGAATTAGTGGATATTATGAAATGGATTTATCTAAAAAACTCATCCTATTGAATTTCATTTGTGACGAAGCTTTGAGCACTGCGAAGCTAAGGAGTTATATTGATGATCAAAATGAAGTATTTGTTGAATATAAAAAAGAAGCAAAATCTAAGGTTGCTGCTGCTAAAGAAAAGGAGAAAAATATTAAGAAGAAGTTGCAGGATGAAATGGCCAAAGCAATTATGGCAAATTGTGCAGATCTTTCAGTTTCAGAACATAATGCTCTTATTTCAAAAATAAAAAGTGAAGCAGCTGAAGCGCATGCTGAGTTGGTTGAAACCAAGGGCACATTTCCTAAACGGAACCAGTGTTGTGAAGTGGTGAGAATTGTACCAGAATACTTGGATGGCAGTGGTAAGACATTTTGGAAACTAAAAAGCTATAGTGGCGAATATGCTTTCATGTTACAAGATGTCaagatacatgatgaagatgcagctgaagttgacgaAAAATGGTTGGTTTATGAAGCTAAGCAGAAGGATGAGATTAACAAGTATATTTCCTCTAAGAGAGGTTGA 1803 0.36 MELDLVSTPQMNEIDVVDGSGQQVSRNNSRGIRVVGSRIYDSENGKSCHQCRQKTRDFTAVCKNPRNGKPCAIRFCHKCLLNRYGEKAEEVDRLDDWMCPKCRGICNCSLCMKKRGQQPTGLLIRTAKASGFKSVSEMLNNKASQDSESNEVNMDAVLPTNEATLVKELAVDLFGELGKENSIDEKKGLKVENGKTKKMKREKLKEISNGGSVDGACQQNKKLKKPKLCNGVSDGGVKRNANDEMETKVKENHAMVHSQIDGPLTCQTSDVMDHSDNAGAINQVAKDIVEIIPLPTGSEITKISDIEFSPEDVGNALQFLEFCRVFGKALDMKKGEGEAILRALIRKLTLRRGEKTLVVEFQIKLLTLIISDSGIRYPSLTASNGKKSWLKALEDLITESDIVLKEFPLDLLNKGISGYYEMDLSKKLILLNFICDEALSTAKLRSYIDDQNEVFVEYKKEAKSKVAAAKEKEKNIKKKLQDEMAKAIMANCADLSVSEHNALISKIKSEAAEAHAELVETKGTFPKRNQCCEVVRIVPEYLDGSGKTFWKLKSYSGEYAFMLQDVKIHDEDAAEVDEKWLVYEAKQKDEINKYISSKRG 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00358 600 Coils Coil 459 490 - -
Car02g00358 600 ProSiteProfiles DDT domain profile. 310 375 IPR018501 -
Car02g00358 600 PANTHER OS05G0300700 PROTEIN 21 597 - -
Car02g00358 600 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 406 449 IPR028942 -
Car02g00358 600 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 40 139 IPR018866 -
Car02g00358 600 PANTHER OS05G0300700 PROTEIN 21 597 IPR040221 GO:0006355
Car02g00358 600 SMART testlast3 310 375 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00358 Car-Chr2 3889757 3894297 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Car02g00358 zf-4CXXC_R1 1.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00358 - - mtr:MTR_6g017265 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00358 02 3889757 3894297 Car02g00358 02 3889757 3894297 ECH