Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00353 ATGGAAGTTAATGAAAAATGTGATGTGTATAGTTTTGGAATTTTTGCATTGGAAATACTTTTTGGAAAACATCCAGAAGATGTTACGTCTTATTCAATGTTATCATCTTTATGGACTCTAGTGAGCTCAACAGCTGGTACTAAGTCATTGATCGATAAGTTTGATGAACGACTACCTCCTCCTTTAAATCCAATTATTAATGAGTTAGTATCGACTATAAGGATTGTAGCTTCTTGTGTGGCTGAAAGTCCACGTTCTCGCCCAACCATGAACCAAGTTTCCAAGGATCTAAAAATGTCCCAAAAGTTTTCTGATTAG 318 0.3553 MEVNEKCDVYSFGIFALEILFGKHPEDVTSYSMLSSLWTLVSSTAGTKSLIDKFDERLPPPLNPIINELVSTIRIVASCVAESPRSRPTMNQVSKDLKMSQKFSD 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00353 105 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 102 - -
Car02g00353 105 MobiDBLite consensus disorder prediction 84 105 - -
Car02g00353 105 Pfam Protein tyrosine and serine/threonine kinase 3 97 IPR001245 GO:0004672|GO:0006468
Car02g00353 105 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 102 - -
Car02g00353 105 Gene3D Transferase(Phosphotransferase) domain 1 1 104 - -
Car02g00353 105 SUPERFAMILY Protein kinase-like (PK-like) 3 95 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00353 Car-Chr2 3809657 3809974 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00353 2 103 Receptor kinase-like Gene Family AT5G56040 32.353 9.67e-12 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car02g00353 PK_Tyr_Ser-Thr 3.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00353 - - mtr:MTR_7g050990 113.62