Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00340 ATGTTAAACGAAGTGCTACAAATGTTACCACCGGGTTATAAGTTTCTACCAACTGATGTTGAGTTAATCAAATACTATTTACAACCAAAGATTGCTAATCATCATATTATTGCTGGTCCAATTTATGACGTGGATGTTTATCAAATTCGCCTAATAATCCTTTATGCCATGTATAAACGTGAAGGAGAGCAACATACATATTTCTTCACTAAAAGAAATAGGAAATATCCAAAAGGAGAACGTCCAGATCGTGGTGTTAGAGGTTTTGGTTTCTGGAAAGCTACTGGAATTGATCATCCAATAAATGACAATGGCACTATAATTGGATTTAAAAAGACTTTGGTATTTTATAGAGGAAATCCTAAAGGTGGTGACAAAACTAATTGGATTATGCAAGAGTACACCATAAATATTGAGAATATTGAGAGCACAAGTACAACTCCTACTTCTCAGGTAAAATAA 462 0.3355 MLNEVLQMLPPGYKFLPTDVELIKYYLQPKIANHHIIAGPIYDVDVYQIRLIILYAMYKREGEQHTYFFTKRNRKYPKGERPDRGVRGFGFWKATGIDHPINDNGTIIGFKKTLVFYRGNPKGGDKTNWIMQEYTINIENIESTSTTPTSQVK 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00340 153 ProSiteProfiles NAC domain profile. 9 153 IPR003441 GO:0003677|GO:0006355
Car02g00340 153 Gene3D NAC domain 18 152 IPR036093 GO:0003677|GO:0006355
Car02g00340 153 SUPERFAMILY NAC domain 6 140 IPR036093 GO:0003677|GO:0006355
Car02g00340 153 PANTHER NAC TRANSCRIPTION FACTOR 56 4 145 - -
Car02g00340 153 Pfam No apical meristem (NAM) protein 10 135 IPR003441 GO:0003677|GO:0006355
Car02g00340 153 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 4 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00340 Car-Chr2 3595092 3595971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00340 9 146 NAC Transcription Factor Family AT5G08790 46.377 2.46e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car02g00340 NAM 3.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00340 - - cam:101501775 304.679