Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00338 ATGCTACAATTGTTACCACCGGGTTATAAGTTTCTACCAACTGATGTTGAGTTAATCAAATACTATTTACAACCAAAGATTGCTAATCATCATATTATTGCCGGTCCAATTTATGACGTGGATGTTTATCAAAATTCGCCTAATAATCTTTATGCCATGTATAAACGTGAAGGAGAGCAACATACATATTTCTTCACTAAAAGAAATAGGAAATATCCAAAAGGAGAACGTCCAGATCGTGGTGTTAGAGGTTTTGGTTTCTGGAAAGCTACTGGAATTGATCATCCAATAAATGACAATGGCACTATAATTGGATTTAAAAAGACTTTGGTATTTTATAGAGGAAATCCTAAAGGTGGTGACAAAACTAATTGGATTATGCAAGAGTACACCATAAATATTGAGAATATTGAGAGCACAAGTACAACTCCTACTTCTAAGGTAAAATAA 450 0.3333 MLQLLPPGYKFLPTDVELIKYYLQPKIANHHIIAGPIYDVDVYQNSPNNLYAMYKREGEQHTYFFTKRNRKYPKGERPDRGVRGFGFWKATGIDHPINDNGTIIGFKKTLVFYRGNPKGGDKTNWIMQEYTINIENIESTSTTPTSKVK 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00338 149 ProSiteProfiles NAC domain profile. 5 149 IPR003441 GO:0003677|GO:0006355
Car02g00338 149 PANTHER NAC TRANSCRIPTION FACTOR 56 3 142 - -
Car02g00338 149 Pfam No apical meristem (NAM) protein 6 131 IPR003441 GO:0003677|GO:0006355
Car02g00338 149 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 3 142 - -
Car02g00338 149 Gene3D NAC domain 14 148 IPR036093 GO:0003677|GO:0006355
Car02g00338 149 SUPERFAMILY NAC domain 3 136 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00338 Car-Chr2 3575804 3576499 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00338 5 143 NAC Transcription Factor Family AT5G08790 46.763 2.42e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car02g00338 NAM 1.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00338 - - cam:101503045 318.931