Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00326 ATGCCTCCGGCTAAGGGTTCTCGTCTTGAGAATTCTTGGATTGAAAGGCCAACAAATTCTTCATCGCGTGTCTCAAAATTTCTACGGAAGAGAGTTATTGATGAATTAAGCCATCAAAATGTAATGAATCAAGTAGGGTTCTCCACAAACTGGCGTGATCATCCCAAAATCATATACAGCCGTAAATGGATAAGAAATGAAATGAGTTTTCCAATTGATAATAAGCGACTTGCACCTATCATGGAATACTTTCTATTTTTATCCGCTCCTTCAAAGGAGGATTATATGAACAATGTAACATTGAATCAGCGTGTGCAACTTCTATTGGATGCTGGTATCGTTGATTATAATGGCGTGCCAAAAGAGGGACCATCGACCCCTTCTATTGTTCATGAGCAGCTGCCTTGTTTGCGTAACCATGGTTCACCAATCCCGACATTTGCTAATATGAATGTTCTTTGTAACAACCCTGTTTCGGACGGTGGAAATATAAGGACTATCCAAAATAATAATTCTATAAGTTTTCCTACAACAAAAGGAAAATCCGTCCAATATGAAAATTTTAATCCGAAGTTACCTCAAATTGTCTCGGCGGATATTTTGGAACATTCCAATTGTTTTCCTCAGCAACATACAAATAATTTGAACATGGATTTGACAAGATACAGTGGAAGTATGGGGAATATCCAAAATAATGATTCTATAAGTTTTCCTACAAGGATGGGAAATTCCCTCAAATGTGAAGATTTTAATATGAAGTTACCTCAACTTATCTCGACGGATATTTTGGAACATTCCAATCGTTTACCTCAGCAACATGCAAATAATTTCGAGACAGATCTGACAAAAAATAGAGATTGCTTTGAGATGATTACGCAGAATAATGAGTGTATGAGTTTTCCTAACATGATGCCAAGCTTCGAATTGAATATTCAGAAGAATTTCACTCATGATGGTAATACTGAAGCCATGCTAAGACCTACAAAAATACAGAAAATGACGGAGTCTACTTTTGGCGTCTCTTTAGTTAACAATGCAAGTGCTGAGCAATTGTCTTACAAGATGGTTCAACCTCATTCTATTGAAGCACTTTCCGAAGTGCAGCAACAACAGTTAGAATTTCCCTTCGCATCTGTCGATGGTGAAGTTGATAAGTACAGTGTGGAAGAGTTTACAAATCTAGTTCTTGGCTTTAGTGAGATAAACAGCAATGTGATGGTTGATACATTTGGAAAAACTTTAAAGACTAACACATTTCCCTCTAAAGGCTTAGAAGTTGCTACTGAAAGGCATGATGTGATGGATAGCAACAACTTAAATGAATTTGACATTGGATTGAGTTCCAATATGCGTACTCTCAGTATGGATGATATTCCTACTGATGGAGGGGGTATAAAAGGAAGAAATGAATTTGACCAGGCTGAGACAAATGCTAAAAAGAAAGTTCTTGAGCCAAAAGCCGATCAAGAGATGCAAATAAAGTCTTCAAGTACAATTGCTGGGGAGATACAGAACAATGCGAGTGTTGATACATTTGGACAGACTTTCAAGAGTGAAATAACTCCCTCAAAAGGCTTAGATGCTAGTCCGGTGTTTGAGGAGCCAGATCCTGAAATCCATGGTGTGTTTGACATTGGATTCAACCAGGAGGCGACAAATGCTAAAAATAAACAGAAGCAAAAGGCTGATCAAGAGAAGCAAACAAAGTCCTCAAATACAACAGTTAATGCTGTTTCCTTGATTGATTTGTTCACACGTGATCAAATAAAAGAACATATTAATAGTCTGAGAAAGGAATCCGTTCAGAGGACAACAGTGGACGGCACATGCCAATTATGTACAAAGAAAGCTTTCTACTTCGCATCAGTACAAGTTTATTGCTTACATTGTCAAACCCGTATCAAGCGAAACGCAAAGTATTTCTGTAGAAAAGGAGAAGAATTTGATGCAGAGCGTTGCTTTTGCTCCTCCTGCTATAACCGTTCTAAAGGCGGGTGCATTATATTCAATGGGACATCTATTTGTAAGACACTTTTTGAACAAAAGAAAAATGATGAAGTACTTGAAGAACCATGGGTTGAATGCAATAAATGCAAAAGATGGCAACATCAAATATGTGCACTATATAACAGCAAAAGAGATTTGGACTGCACTGCTGAATATACATGTCCTTTTTGCCACGTAAAAGAAATTGAAAATGGAACGCATGTTCCCTTACCAAAGACTACTATTTTTGGTGCTAAGGACTTGCCGAGAACCATGCTTAGTGACCACTTAGAGAAAAGACTTTATGAGCGTCTCATGCAAGAGAAAGCAGACTGGGAAAAAATCGAAGGGAATGAGAATCTTGATGAGGTTGTAGCAGCGAAAAGTCTTACAGTTAGAGAAGTGTTATCTACTGACAAACAACTGATAGTGGAGAAGCAATTTCTGGACATCGTTCCAGAGGAGAATTACCCTGCCGAGTTCTCTTATAGATCAAGAGTTATTCTTCTGTTTCAGCAGATTGAAGGAGCAGATGTATGCATATTTGGAATGTACGTCCAGGAGTACGGCTCGGAATGTGCCAATCCGAATCAACGTTGCATATATATTTCATATCTTGATTCTGTCAATCATTTTATACCTCGAAGACGGACTAGGAGCGGAGGAGCTCTTCGTACCTTTGTTTACCATGAGATATTGATTGGGTATCTTGATTTTTGTAAGAAACGAGGTTTTACAAAATGCTATATATGGTCCTGTCCTCCTAAAAAAGAGGATAATTATATTCTACATTGTCATCCAAAAACTCAAAAGACTCCAAAGGATGATAAACTAGTGGACTGGTATCATTCAATGCTAAAAAAGGCTACTGAAGAAAATGTCGTTGTTGGTTTAACCGACGTGTATGATCATTTTTTTGTTCCTACTGAAAAATGGAACTCCAAGGTGACAGCTGCTCGTTTGCCATACTTCTATGGAGACTACTGGTGTAATCATGCTATGGAACTAGCCATCGACATTGAAAAAGAGTGTGGAGGAGAGTATGAAAAGACATTGAAGAAAGTAGTGAAAAATAGATCTTTAAAGGCCATGGGACATGTAAATCCTTTGAAAGGCAATGCCAAAGACATTATGGTGATGCAAAAACTGGGCCAAATTATGTTGCAGTCAAAGAAAAACTTCATCGTAGCACACTTGCAGTATTCATGCATTCACTGCCATGAAGCAATACTATCTGGGAAGCGATGGTTTTGCACTAAATGCAAGAAATTTCAGGAGTGCGATAGATGTCATACCGCTGATGTACACACTTCAATTAATGGCGAGGTGCATACACTCTGTCAGGTTGTTGTGGATGATATCCCCTTCAACACCGAACAAAATGATATCATCATTGAGAATGAATTATTTGAAAGTAGGAGTAAATTTTTGAGGTTCTGCAAGAAGAATCAGTTTCAGTTTGACACGCTCCGCCGTGCCAAGTACTCCACAATGATGATCCTAGATCATCTTAAGGGTCTTACTCTGCTGACTGTTGGAACAGTATGTAGCATTTGTTCACAGAATATACTCCAACAGAGCTGGAAATGTGAGATGCGATGGAAACTGATGGAGGTTTTGGAGCATGTATCTCAATGTTCCTCAACTAAAACTGAAAGATGCTGTTATCGAAACTGTTTTCAAATGAAAAAGTTATTAGTTCATGCCAACCAGTGTACTACTCGAGTTTTGGGGGGCTGCCGTCGCTGTAAAAAGGTTTTGCAGATACTAACTTATCACTGCAAGAATTGCAAAGACTCAGAATGTCGCATACCACATTGCATGGATAAGCTAGCAGAATTGATAGCCAAACAATCTGCATCTCATGATATAGCTGCAGTTGTGGAAAGCAACAGAAGTCAATGA 3891 0.3845 MPPAKGSRLENSWIERPTNSSSRVSKFLRKRVIDELSHQNVMNQVGFSTNWRDHPKIIYSRKWIRNEMSFPIDNKRLAPIMEYFLFLSAPSKEDYMNNVTLNQRVQLLLDAGIVDYNGVPKEGPSTPSIVHEQLPCLRNHGSPIPTFANMNVLCNNPVSDGGNIRTIQNNNSISFPTTKGKSVQYENFNPKLPQIVSADILEHSNCFPQQHTNNLNMDLTRYSGSMGNIQNNDSISFPTRMGNSLKCEDFNMKLPQLISTDILEHSNRLPQQHANNFETDLTKNRDCFEMITQNNECMSFPNMMPSFELNIQKNFTHDGNTEAMLRPTKIQKMTESTFGVSLVNNASAEQLSYKMVQPHSIEALSEVQQQQLEFPFASVDGEVDKYSVEEFTNLVLGFSEINSNVMVDTFGKTLKTNTFPSKGLEVATERHDVMDSNNLNEFDIGLSSNMRTLSMDDIPTDGGGIKGRNEFDQAETNAKKKVLEPKADQEMQIKSSSTIAGEIQNNASVDTFGQTFKSEITPSKGLDASPVFEEPDPEIHGVFDIGFNQEATNAKNKQKQKADQEKQTKSSNTTVNAVSLIDLFTRDQIKEHINSLRKESVQRTTVDGTCQLCTKKAFYFASVQVYCLHCQTRIKRNAKYFCRKGEEFDAERCFCSSCYNRSKGGCIIFNGTSICKTLFEQKKNDEVLEEPWVECNKCKRWQHQICALYNSKRDLDCTAEYTCPFCHVKEIENGTHVPLPKTTIFGAKDLPRTMLSDHLEKRLYERLMQEKADWEKIEGNENLDEVVAAKSLTVREVLSTDKQLIVEKQFLDIVPEENYPAEFSYRSRVILLFQQIEGADVCIFGMYVQEYGSECANPNQRCIYISYLDSVNHFIPRRRTRSGGALRTFVYHEILIGYLDFCKKRGFTKCYIWSCPPKKEDNYILHCHPKTQKTPKDDKLVDWYHSMLKKATEENVVVGLTDVYDHFFVPTEKWNSKVTAARLPYFYGDYWCNHAMELAIDIEKECGGEYEKTLKKVVKNRSLKAMGHVNPLKGNAKDIMVMQKLGQIMLQSKKNFIVAHLQYSCIHCHEAILSGKRWFCTKCKKFQECDRCHTADVHTSINGEVHTLCQVVVDDIPFNTEQNDIIIENELFESRSKFLRFCKKNQFQFDTLRRAKYSTMMILDHLKGLTLLTVGTVCSICSQNILQQSWKCEMRWKLMEVLEHVSQCSSTKTERCCYRNCFQMKKLLVHANQCTTRVLGGCRRCKKVLQILTYHCKNCKDSECRIPHCMDKLAELIAKQSASHDIAAVVESNRSQ 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00326 1296 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 678 726 IPR013083 -
Car02g00326 1296 PANTHER CBP/P300-RELATED 468 1271 IPR013178 GO:0004402|GO:0006355|GO:0016573
Car02g00326 1296 Pfam TAZ zinc finger 1198 1269 IPR000197 -
Car02g00326 1296 ProSiteProfiles Zinc finger TAZ-type profile. 1179 1272 IPR000197 -
Car02g00326 1296 SMART KAT11_2 779 1072 IPR013178 GO:0004402|GO:0006355|GO:0016573
Car02g00326 1296 Pfam Histone acetylation protein 785 1001 IPR013178 GO:0004402|GO:0006355|GO:0016573
Car02g00326 1296 Coils Coil 548 568 - -
Car02g00326 1296 Gene3D - 1056 1107 IPR043145 -
Car02g00326 1296 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 744 1171 IPR031162 GO:0004402
Car02g00326 1296 ProSiteProfiles Zinc finger PHD-type profile. 652 729 IPR019787 -
Car02g00326 1296 CDD PHD_HAC_like 654 726 - -
Car02g00326 1296 ProSiteProfiles Zinc finger ZZ-type profile. 1060 1116 IPR000433 GO:0008270
Car02g00326 1296 SUPERFAMILY TAZ domain 1195 1272 IPR035898 -
Car02g00326 1296 SMART TAZ_2 1187 1270 IPR000197 -
Car02g00326 1296 PANTHER HISTONE ACETYLTRANSFERASE HAC2 468 1271 - -
Car02g00326 1296 Gene3D TAZ domain 1187 1296 IPR035898 -
Car02g00326 1296 SUPERFAMILY RING/U-box 1040 1098 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00326 Car-Chr2 3452541 3460303 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Car02g00326 HAT_KAT11 7.1e-32 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00326 K04498 - aprc:113866525 999.193