Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00323 ATGCTTCAGTCCATGAAGCTAGTAATGGTGTTTTTTGCTTTGACAATAGCCTTGACAATGTCATCTAGTGCTTCAACTATACAAAGCATAGAAGCAAGTGCTTTGTTGAAGTGGAAAACAACATTTGACAACCAAAGCCAAACTTTGCTATCTTCATGGACAAGCAACAATTCATGCAACTGGTTGGGAATTACGTGTGATGAGTTCAAACATGTCTCTAACGTAAATCTCAACAACATAGGATTAAGAGGTACGCTTGAAAGTCTCAACTTCTCATTACTTCCAAACATCCTCACTCTAAATATTAGTCACAACTTCTTGAATGGAAGTATTCCACCCAATATTGGGGTCTTATCCAAACTCTCTCATCTTGATCTTAGCGCCAATTATTTCATAGGAACAATTACATCTGAAATAACACATTTGTCCAATCTTCAAACATTATATTTGGATGGTAATCTTTTCAATAGTTCCATTCCTCGAGAAATAGGTGCATTAAAAAATTTGAGAGAGCTTAGTATAGCACAAGCAAATCTAGAAGGGACAGTTCCAATTTCTATTGAGAACTTGTCATTGTTGTCACATTTAGATCTTGCAGAGAACAATCTTTCTGGCAACATTCCAAAAGAAATTTGGAATTTGCAGAGCTTGAAGTACTTTGTGATTAACCTAAATAACTTTAATGCTCATAACCAAATTTCTGGCAACCCTCGGGAGATTGGAGAGTTGGTAAGCTTGAGAGAACGCACCCTTTCTGACAATAACTGTTCTAGATCTATTCCATTAGAAATTTTAAGCTTGACTAATCTAGAGCATCTAAGACTTGATAATAACACATTCTCAGGAGACATTCCTAAGGAAACTGGGAAGTTGGTCAACATGACGATTTTGTGGCTTCAAAACAATAGTCTTTCTGGTTCAATTCCTCATGAAATCGGAATGATGACAAATATGTACCAACTTGATTTGTCAAATAATTTTCTCTCTGGAAATATCCCACCTACAATTGGAAACTTGAGTAATTTAATGTATCTTTATCTTTATACAAATAGTCTTAGTGGTTTAATTCCAAATGAAGTTGGTAAACTATATTCTCTCCCCACTCTCCAATTGGTAGATAACAAACTCTCTGGCTCAATCCCATCTTCCATAGGTAACTTGGTCAATTTGGAATCCATTTACATATCTCAGAATCAATTCTCAGGACCAATTCCTTCCACTATAAAAAATTTGAACAACCTTAGAGAAATATTTTTATTCTCAAATCAACTAACTAACATCATTCCTACTGAAATGAACATGATTATCAATTTGGAAAATTTGCAATTAGCTAATAATAATTTCATTGGCCAGTTGCCACACAACATTTTCATTGGTGGAAAGTTGCAAAGAATTTTTGCATTGAATAATCACTTCACAGATCCAGTTCCAATGAGTTTGAAAAATTGTTCTAGTCTCATTAGAGTTAGGCTTGATCAAAACCAATTTACGGAAAATATAACTAACGATTTTGGTGTATATCCAAATTTGGACTACATAGGATTAAGTGAAAATAAATTTTATGGCCACCTTTCTCCCACTTGGGGAAAGTGCTACAACCTCACAAGCCTTGATATCTCCAACAATAACTTATCTGGTGGCATACCACCAGAACTAGGGGAGGCAACCAAGTTAGAGTTACTCGACTTGTCTTCAAACCATCTTACAGGAAAAATTCCAGAGGAGTTAGGCAAGTTAACTTTGTTGATCAACCTTGTGATGAGTAACAACCGTCTTTTAGAAAATGTTCCTACACAAATGTCATCATTGCAACAACTCAATAACTTAGAGCTTGCAGCAAATAATTTAACTAGCTTCATCACAAAACAACTTGCAAATTTGCCAAGGTTATTTAACCTAAATTTGAGCCAAAACAAATTTGAAGGAAATATTCCAGTTGAATTTGGTCAATTCGAAGCTCTTCAAATTCTTGATCTTAGTGGAAATTCTTTGAATGAAACAATACCATCCCCATTTAGCTTGCTCAAATGTTTAGAAAAAATGAATCTATCACATAATAATCTCTCTGGTCATATTCCCTCCAATTTCAATCAAATGATTAGCTTATCATTTGTTGATATATCATTTAATCAATTGGAGGGTCCAATTCCAAACATGAAAGATTTCAACAATGCTACATTTGAGATGTTGGGAAATAATAAAAGCCTGTGTGGTAATATCTCAGGCATGGAGCCTTGCCCAACAACAACAAGCAGTAAATCTCATGATAAGATTAACAAAGTCTTATTATTAGTTTTACCCCTTATAGTTAGAATTCTAATACTAACATTGGTATTTTTTGGATTCTCATATCATCGTTGCCAAATTTCAACCAGAAAAGAATATCAAGGTTCAGAAACAAATGCTCAAAACATATTTGCAATATGGGGTTATGATGGAAAAATAGTGTATGAGAACATTATTGCTGCCACAGAAGAGTTTGATGACAAATATCTCATTGGAGTTGGAGGGAATGGAAGTGTTTACAAAGCAGACTTACCCACGGGTCAAGTTGTTGCTGTCAAAAAAATGCATTCAGTGCCAAATGAAGAAATGTCTACTATGAAAGCTTTCACAAATGAGATCAAAACTCTGATAGAAATTCAACATCGTAACATTGTCAAGCTCTACGGGTTTTGTTCACATTCTAGATTCTCATTTTTGGATAAAAGTAGTGTGGATAAGATTTTGAAAGATGAGGAACAAACAATTGCATTTGATTGGAGAAGAGGATGA 2775 0.3452 MLQSMKLVMVFFALTIALTMSSSASTIQSIEASALLKWKTTFDNQSQTLLSSWTSNNSCNWLGITCDEFKHVSNVNLNNIGLRGTLESLNFSLLPNILTLNISHNFLNGSIPPNIGVLSKLSHLDLSANYFIGTITSEITHLSNLQTLYLDGNLFNSSIPREIGALKNLRELSIAQANLEGTVPISIENLSLLSHLDLAENNLSGNIPKEIWNLQSLKYFVINLNNFNAHNQISGNPREIGELVSLRERTLSDNNCSRSIPLEILSLTNLEHLRLDNNTFSGDIPKETGKLVNMTILWLQNNSLSGSIPHEIGMMTNMYQLDLSNNFLSGNIPPTIGNLSNLMYLYLYTNSLSGLIPNEVGKLYSLPTLQLVDNKLSGSIPSSIGNLVNLESIYISQNQFSGPIPSTIKNLNNLREIFLFSNQLTNIIPTEMNMIINLENLQLANNNFIGQLPHNIFIGGKLQRIFALNNHFTDPVPMSLKNCSSLIRVRLDQNQFTENITNDFGVYPNLDYIGLSENKFYGHLSPTWGKCYNLTSLDISNNNLSGGIPPELGEATKLELLDLSSNHLTGKIPEELGKLTLLINLVMSNNRLLENVPTQMSSLQQLNNLELAANNLTSFITKQLANLPRLFNLNLSQNKFEGNIPVEFGQFEALQILDLSGNSLNETIPSPFSLLKCLEKMNLSHNNLSGHIPSNFNQMISLSFVDISFNQLEGPIPNMKDFNNATFEMLGNNKSLCGNISGMEPCPTTTSSKSHDKINKVLLLVLPLIVRILILTLVFFGFSYHRCQISTRKEYQGSETNAQNIFAIWGYDGKIVYENIIAATEEFDDKYLIGVGGNGSVYKADLPTGQVVAVKKMHSVPNEEMSTMKAFTNEIKTLIEIQHRNIVKLYGFCSHSRFSFLDKSSVDKILKDEEQTIAFDWRRG 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00323 924 SMART LRR_sd22_2 315 341 - -
Car02g00323 924 SMART LRR_sd22_2 118 147 - -
Car02g00323 924 SMART LRR_sd22_2 291 306 - -
Car02g00323 924 SMART LRR_sd22_2 603 629 - -
Car02g00323 924 SMART LRR_sd22_2 387 413 - -
Car02g00323 924 SMART LRR_sd22_2 166 192 - -
Car02g00323 924 SMART LRR_sd22_2 555 578 - -
Car02g00323 924 SMART LRR_sd22_2 675 698 - -
Car02g00323 924 Gene3D Phosphorylase Kinase; domain 1 787 901 - -
Car02g00323 924 SUPERFAMILY Protein kinase-like (PK-like) 808 912 IPR011009 -
Car02g00323 924 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 171 285 - -
Car02g00323 924 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 153 227 - -
Car02g00323 924 Gene3D Ribonuclease Inhibitor 334 418 IPR032675 -
Car02g00323 924 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 341 922 - -
Car02g00323 924 ProSitePatterns Protein kinases ATP-binding region signature. 833 856 IPR017441 GO:0005524
Car02g00323 924 Pfam Leucine rich repeat 508 568 IPR001611 GO:0005515
Car02g00323 924 Pfam Leucine rich repeat 366 424 IPR001611 GO:0005515
Car02g00323 924 SUPERFAMILY L domain-like 436 748 - -
Car02g00323 924 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Car02g00323 924 SUPERFAMILY L domain-like 66 325 - -
Car02g00323 924 SUPERFAMILY L domain-like 230 499 - -
Car02g00323 924 Pfam Protein kinase domain 829 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00323 924 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 341 922 - -
Car02g00323 924 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 232 350 - -
Car02g00323 924 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 171 285 - -
Car02g00323 924 SMART LRR_typ_2 190 214 IPR003591 -
Car02g00323 924 SMART LRR_typ_2 435 459 IPR003591 -
Car02g00323 924 SMART LRR_typ_2 531 555 IPR003591 -
Car02g00323 924 SMART LRR_typ_2 315 339 IPR003591 -
Car02g00323 924 SMART LRR_typ_2 267 291 IPR003591 -
Car02g00323 924 SMART LRR_typ_2 142 166 IPR003591 -
Car02g00323 924 SMART LRR_typ_2 675 698 IPR003591 -
Car02g00323 924 SMART LRR_typ_2 94 118 IPR003591 -
Car02g00323 924 SMART LRR_typ_2 651 674 IPR003591 -
Car02g00323 924 SMART LRR_typ_2 556 579 IPR003591 -
Car02g00323 924 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 153 227 - -
Car02g00323 924 Gene3D Ribonuclease Inhibitor 30 136 IPR032675 -
Car02g00323 924 ProSiteProfiles Protein kinase domain profile. 827 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00323 924 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 7 169 - -
Car02g00323 924 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 232 350 - -
Car02g00323 924 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 7 169 - -
Car02g00323 924 Gene3D Ribonuclease Inhibitor 433 749 IPR032675 -
Car02g00323 924 Gene3D Ribonuclease Inhibitor 137 232 IPR032675 -
Car02g00323 924 Gene3D Ribonuclease Inhibitor 233 333 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00323 Car-Chr2 3419495 3422476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00323 14 923 Receptor kinase-like Gene Family AT4G08850 39.655 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car02g00323 Pkinase 4.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00323 - - gmx:100808316 983.4