Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00307 ATGAGTAACAACCGTCTTTTAGGAAATGTTCCTACACAAATGTCATCATTGCAGCAACTCAATAACTTAGAGCTTGCAGCAAATAATTTAACTAGCTTAATCACAAAACAACTTGCAAATTTGCCAAGGTTATTTAACTTGAATTTGAGCCAAAACAAATTTGAAGGAAATATTCCAGTTGAATTTGGTCAATTCGAAGCTCTTCAAATTCTTGATCTTAGTGGAAATTGTTTGAATGGAACAATACCATCCCCATTTAGCTTGCTCAAATATTTAGAAAAAATGAATCTGTCACATAATAATCTCTCTGGTCATATTCCCTCCAATTTCAATCAAATGATTAGCTTATCATTTGTTGATATATCATTTAATCAATTGGAGGGTCCAATTCCAAACATGAAAGCTTTCAACTATGCTACATTTGAGCTGTTGGAAAATAATAAAGGCATGTGTGGTAATATCTCAGGCTTGGAGCCTTGCCCAACAACAACAAGCAGTAAATCTCATGATAAGATTAAGAAAGTCTTATTATTAGTTTTACCCCTTATAGTTGGAATTCTAATACTAACATTAGTATTTTTTGGATTCTCATATCATCGTTGCCAAATTTCAACCAGAAAAGAATATCAAGGTTCAGAAACAAATGCTCAAAACGTATTTGCAATATGGGGTTATGATGGAAAAATAGTGTATGAGAACATTATTGCTGCCACAGAAGAGTTTGATGACAAATATCCCATTGGAGTTGGAGGGAATGGAAGTGTTTACAAAGCAGACTTACCCACGGGTCAAGTTGTTGTTGTCAAAAAAATGAATTCAGTACCAAATGAAGAAATGTCTACTATGAAAGCTTTCACAAATGAGATCAAAACTCTGATAGAAATTCGGCATCCTAACATTGTCAAGCTCTACGGGTTTTGTTCACATTCTAGATTCTCATTTTTGGATAAAAGTAGTGTGGATAAGATTTTGAAAGATGAGGAACAAACAATTGCATTGGATTGGAGTAAGAGGATGAATGTCATAAAAGATGTAGCTAATGCTTTGTGCTACATGCACCACGATTGTTCACCTCCAATTGTTCATCAAGATATATCGAGCAAGAAGGTTTTGTTGGATTTGGAATATGTGGCTCATGTCTCTACCTTTGGGACATCTAAGCTTCTTAATCCTAATTCAACCAATAGGACCACATATGCTAAAACCTTTGGATATGCTGCTCCAGAATTGGCATACACAATGGAAGTTAATGAAAAATGTGATGTGTATAGTTTTGGAATTTTTGCATTGAAAATACTTTTTGGAAAACACCCGGGAGATGTTACATCTTATTCAATGTTATCATCTTTATGGACTACAGTGAGCTCAACAACTGGTACTAAGTCATTGATGGATAAGTTTGACGAACGACTACCTCCTCCTTTAAATCCAATTGTTAATGATTTAGTATCGATTATAAGGATTGTAGCTTCTTGTGTGACTGAAAGTCCACGTTCTCGCCCAACCATGGACCAAGTTTCCAAAGATCTAAAAAAATGTCCCAAAAGTCTTCTGATTAGTTGA 1563 0.3474 MSNNRLLGNVPTQMSSLQQLNNLELAANNLTSLITKQLANLPRLFNLNLSQNKFEGNIPVEFGQFEALQILDLSGNCLNGTIPSPFSLLKYLEKMNLSHNNLSGHIPSNFNQMISLSFVDISFNQLEGPIPNMKAFNYATFELLENNKGMCGNISGLEPCPTTTSSKSHDKIKKVLLLVLPLIVGILILTLVFFGFSYHRCQISTRKEYQGSETNAQNVFAIWGYDGKIVYENIIAATEEFDDKYPIGVGGNGSVYKADLPTGQVVVVKKMNSVPNEEMSTMKAFTNEIKTLIEIRHPNIVKLYGFCSHSRFSFLDKSSVDKILKDEEQTIALDWSKRMNVIKDVANALCYMHHDCSPPIVHQDISSKKVLLDLEYVAHVSTFGTSKLLNPNSTNRTTYAKTFGYAAPELAYTMEVNEKCDVYSFGIFALKILFGKHPGDVTSYSMLSSLWTTVSSTTGTKSLMDKFDERLPPPLNPIVNDLVSIIRIVASCVTESPRSRPTMDQVSKDLKKCPKSLLIS 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00307 520 Gene3D Ribonuclease Inhibitor 1 169 IPR032675 -
Car02g00307 520 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 513 - -
Car02g00307 520 ProSitePatterns Protein kinases ATP-binding region signature. 247 270 IPR017441 GO:0005524
Car02g00307 520 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 513 - -
Car02g00307 520 ProSiteProfiles Protein kinase domain profile. 241 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00307 520 SUPERFAMILY Protein kinase-like (PK-like) 223 510 IPR011009 -
Car02g00307 520 Gene3D Phosphorylase Kinase; domain 1 201 315 - -
Car02g00307 520 SUPERFAMILY L domain-like 1 153 - -
Car02g00307 520 Pfam Protein kinase domain 243 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car02g00307 520 Gene3D Transferase(Phosphotransferase) domain 1 316 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00307 Car-Chr2 3228288 3229936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00307 1 408 Receptor kinase-like Gene Family AT4G08850 45.107 3.15e-115 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car02g00307 Pkinase 6.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00307 - - mtr:MTR_7g039330 622.854