Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00296 ATGTCAATGACATTGTTCACAAACATGAACAAAATTGAGACACTTCTCAGTGCACCAAACAACAACCTTAGTCCAAACCACAAAAGATGGCACAATGCATTCATGAAAATCTATTGTTCTAGAGCTTTTATGTCATCATATTTCAACATAAAACCAAAAATCACAAACACCCCATTTTTCACATTGGTTGATTTGAATTCACCACACTCTTTTACCATTGATCAATCAACTCTAATTGAAATTGTCAAAGATAAAAACATTGAAACCCTTCAAAAACATGGTGGAGTTGAAGGTGTTGCTTCATCCCTTAAAACCAACATTGAGTTTGGTATCAAAAATGATGAAAATTTTGAAGATGTTTCAATTAGACAAAAAGTGTTTGGTTCCAACACTTATACAAAACCACCTTCAAAAAATTTATTTCATTTTATTGTTGAAGCTTTTAAGGATATTACAATTTTGATCCTTTTAGTTTGTGCTTCTCTTTCACTTGGCTTTGGTATTAAAGAACATGGAATCAAAGAAGGTTGGTATGATGGTGGTAGCATTTTTCTAGCTGTTTTCATTGTTATTTCAATGTCATCAATAAGCAACTTTAGACAAAACAAACAATTTGATAAATTGTCTGAAGTTAGCAATGATATTCAAATTGATTTGGTTCGAAATAATCGAAGAAAAAAGGTATCGATTTTCGATATTGTTGTTGGTGACATTGTTTGTTTGAAGATTGGTGATCAAGTACCTGCTGACGGATTATTCGTTGATGGACATTCATTGAGAGTCGATGAATCGAGCATGACGGGCGAGAGTGACCATGTTGAGATCAATAGAAAAGACCATCCTTTTTTGTTATCCGGGACAAAAGTTGTTGATGGTTATGCGAAAATGCTCGTTACATCGGTCGGAATGAACACAACATGGGGACAAATGATGAGTTCTATAAGCAATGACATCGACGAGGAAACGCCTTTACAAGCAAGGCTTAACAAGCTAACATCATCCATTGGAAAGGTTGGTTTATCTGTCGCGCTTTTGGTCCTTGTTGTTTTGTTTATTCGATATTTCACGGGGAACACGAAGGACGAAAATGGAGTTAGAAAGTATAATGGAAGAAAGACTAGTTTTGATGATGTGATGAATGCAGTCATTGGAATTATAGCTGATGCTGTTACTATTGTTGTTGTTGCAATCCCTGAGGGTTTGCCCTTAGCTGTTACTTTGACACTTGCTTACTCAATGAAGAAAATGATGGCTGATCAAGCTATGGTGAGAAAACTTTCAGCTTGTGAGACTATGGGATCAGCTACTACTATTTGCACCGATAAAACAGGTACACTCACTTTGAATCAAATGAAAGTGACAAAGTTTTGGCTTGGTTTAGAACCATTGGAAGAGGGTGAGAATGGATTTTCGTACTCAAATATTGATCCATTTGTTCTTCAATTGATCAAAGAAGGAGTGGCTCTTAATACAACGGGAGGCGTTCAAAAATCTATATTATGTTCTGATCATGATTCAAAGTTTGAGTTTTCTGGAAGTCCAACAGAAAAGGCAATTCTATCGTGGGCGGTTTTGGATTTGAAAATGGAGATGGAAAATTTGATACAAAGTTGTTCTATTATTCAAGTTGAGACTTTCAATTCAAAGAAGAAAAGAAGTGGAGTTTTGTTTAGAAGAAATTTTGACAAAAAAGTCAATGCACATTGGAAAGGAGCAGCTGAAATGGTACTAAGAATGTGTTCAAGATACTATGATGCTTATGGGAATGTGAAAGATATTGATAGTGATAGCATGTCAAAATTCGAAAGCGCAATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGTATCGCTTTAGCATACGTAGAAGTCGCAGATGAAGAGCTAAGAGGTGTAGGAGACGACAATAAGATGGTGGTAAAAGACAATGGTTTAACATTGTTAGGACTTGTCGGTATTAAGGATCCATGTCGTCCAGGCGTTAAGACAGCCGTGGAAGCTTGTCAACACGCCGGTGTGAATGTCAAAATGATAACAGGTGACAATATTTTCACTGCAAAAGCTATAGCGTTTGAATGTGGAATTCTTAAGTCTAATCAAGACACGAATGATGTAGTAATCGAAGGTGAGAAATTTCGCAACTTTACACATGAAGAAAGAATGAAAAAGGTTGAAAAAATTTGTGTGATGGCAAGATCTTCTCCTTTTGACAAACTTTTAATGGTTCAATGTTTAAAGCAAAAGGGTCATGTAGTTGCTGTCACAGGTGATGGAACAAATGATGCACCTGCTTTGAAAGAAGCTGATATTGGACTTTCAATGGGAATTCAAGGTACTGAAGTTGCAAAAGAGAGTTCAGATATTGTTATATTAGATGACAATTTTGCATCTATAGTAACAGTTTTAAGATGGGGAAGATGTGTTTACAACAACATTCAAAAATTCATTCAATTTCAATTAACAGTGAATGTAGCAGCACTTGTTATAAATTTTATAGCGGCAGTTTCGGCCGGTGAAGTGCCTTTAACGGCAGTTCAACTATTATGGGTCAATTTGATTATGGATACTTTAGGTGCTTTAGCTCTTGCAACTGAAAATCTCACAATGGATTTAATGGATAAACCACCAATTGGTAGAACAAAACCTCTTATAACTAACATCATGTGGAGGAATCTTGTGTCACAAGCAATGTACCAAATAGTTATTTTGTTGACACTTCAATTCAAAGGTGAGTCAATTTTTGGTGTGACAACAAAGGTAAATGACACATTGATTTTCAATACTTTTGTTCTTTGTCAAATATTTAATGAGTTTAATGCAAGGAAATTGGAGAAGAAGAATGTTTTTGAAGGGATACATAAGAGCAAATTGTTTTTGGGAATTGTTGGTTTTACATTAGTGCTTCAAGTTGTGATGGTTGAGTTTTTGAAGAAGTTTGCTAATACAGAAAGGTTGAATTGGAAAGAATGGGCTATTTGCATTGGTTTTGCTGCTGTTTCTTGGCCCATTGGTTTTGTTGTAAAGTTGATTCCTGTTTCAGATAAACCATTACTTGATTTTTTTAATTTTAGGAAGTGA 3075 0.3535 MSMTLFTNMNKIETLLSAPNNNLSPNHKRWHNAFMKIYCSRAFMSSYFNIKPKITNTPFFTLVDLNSPHSFTIDQSTLIEIVKDKNIETLQKHGGVEGVASSLKTNIEFGIKNDENFEDVSIRQKVFGSNTYTKPPSKNLFHFIVEAFKDITILILLVCASLSLGFGIKEHGIKEGWYDGGSIFLAVFIVISMSSISNFRQNKQFDKLSEVSNDIQIDLVRNNRRKKVSIFDIVVGDIVCLKIGDQVPADGLFVDGHSLRVDESSMTGESDHVEINRKDHPFLLSGTKVVDGYAKMLVTSVGMNTTWGQMMSSISNDIDEETPLQARLNKLTSSIGKVGLSVALLVLVVLFIRYFTGNTKDENGVRKYNGRKTSFDDVMNAVIGIIADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPLEEGENGFSYSNIDPFVLQLIKEGVALNTTGGVQKSILCSDHDSKFEFSGSPTEKAILSWAVLDLKMEMENLIQSCSIIQVETFNSKKKRSGVLFRRNFDKKVNAHWKGAAEMVLRMCSRYYDAYGNVKDIDSDSMSKFESAIQGMAASSLRCIALAYVEVADEELRGVGDDNKMVVKDNGLTLLGLVGIKDPCRPGVKTAVEACQHAGVNVKMITGDNIFTAKAIAFECGILKSNQDTNDVVIEGEKFRNFTHEERMKKVEKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASIVTVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATENLTMDLMDKPPIGRTKPLITNIMWRNLVSQAMYQIVILLTLQFKGESIFGVTTKVNDTLIFNTFVLCQIFNEFNARKLEKKNVFEGIHKSKLFLGIVGFTLVLQVVMVEFLKKFANTERLNWKEWAICIGFAAVSWPIGFVVKLIPVSDKPLLDFFNFRK 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00296 1024 PRINTS H+-transporting ATPase (proton pump) signature 601 619 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car02g00296 1024 PRINTS H+-transporting ATPase (proton pump) signature 754 770 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car02g00296 1024 PRINTS H+-transporting ATPase (proton pump) signature 786 811 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car02g00296 1024 SUPERFAMILY HAD-like 437 859 IPR036412 -
Car02g00296 1024 SFLD C1.7: P-type atpase like 421 807 - -
Car02g00296 1024 Gene3D - 118 315 - -
Car02g00296 1024 ProSitePatterns E1-E2 ATPases phosphorylation site. 441 447 IPR018303 -
Car02g00296 1024 Gene3D - 449 655 IPR023299 GO:0000166
Car02g00296 1024 Pfam haloacid dehalogenase-like hydrolase 436 768 - -
Car02g00296 1024 Gene3D - 146 1008 - -
Car02g00296 1024 SFLD p-type atpase 421 807 IPR044492 -
Car02g00296 1024 PANTHER CATION TRANSPORTING ATPASE 19 998 - -
Car02g00296 1024 PANTHER CALCIUM-TRANSPORTING ATPASE 19 998 - -
Car02g00296 1024 Pfam Cation transporting ATPase, C-terminus 839 1009 IPR006068 -
Car02g00296 1024 SUPERFAMILY Calcium ATPase, transmembrane domain M 93 1011 IPR023298 -
Car02g00296 1024 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 79 1011 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Car02g00296 1024 Pfam E1-E2 ATPase 216 417 - -
Car02g00296 1024 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 724 835 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car02g00296 1024 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 382 459 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car02g00296 1024 CDD P-type_ATPase_Ca_PMCA-like 123 887 - -
Car02g00296 1024 PRINTS P-type cation-transporting ATPase superfamily signature 262 276 - -
Car02g00296 1024 PRINTS P-type cation-transporting ATPase superfamily signature 439 453 - -
Car02g00296 1024 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Car02g00296 1024 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Car02g00296 1024 PRINTS P-type cation-transporting ATPase superfamily signature 754 773 - -
Car02g00296 1024 PRINTS P-type cation-transporting ATPase superfamily signature 778 790 - -
Car02g00296 1024 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 446 652 IPR023299 GO:0000166
Car02g00296 1024 Gene3D - 436 799 IPR023214 -
Car02g00296 1024 Pfam Cation transporter/ATPase, N-terminus 93 163 IPR004014 -
Car02g00296 1024 SUPERFAMILY Calcium ATPase, transduction domain A 217 313 IPR008250 -
Car02g00296 1024 SMART Cation_ATPase_N_a_2 92 168 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00296 Car-Chr2 3131971 3135424 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00296 27 1020 Primary Pumps ATPases AT3G63380 66.107 0.0 1289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00296 K01537 - gmx:100793918 1580.46