Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00293 ATGCAAACCAATGAATTAACAGGACTCAATTATTTTCTCCCTAATTCAAACACATCACCTTATCTTCAAAACCACAACATGATTCAAAACAACATTCCAACATTTCAACTCCAAAAATTCTCAAACCAATTATTTAATTACCAAAATATCCCTCCTCATCATCAATTTCATGACTTCAACAGCTCTCAATCATCATGCATAAGCAGCAACTCAACTTCTGATGAAGCTGATGAACAAAACTTAAGTCTCATCAATGAGAGAAAACATCGAAGAATGATATCGAACCGAGAGTCAGCGCGTCGATCGCGCATGAGGAAACAGAAACACCTTGATGAACTATGGTCACAAGTTGTTTGGCTGAGGAATGAGAATCAACAATTGATAGAAAAACTTAACCATGTTTCAGAGAATCATGATCAAGTTGTTCAAGAAAATGCTAAGTTGAAAGAAGAAACATTGGAACTTAGACAAATGTTAAGAGATATGCAAATACAAAGTCCTTTTATTCCTTCTTTTAGCCCTTTGGAAGATCATATCAATTGTAACTCTGAATTTCTTACACCTGATTCTCCAAACAATTCCATCTCAAGTTCCATGGATGATCTTCTTGGCTGA 615 0.3528 MQTNELTGLNYFLPNSNTSPYLQNHNMIQNNIPTFQLQKFSNQLFNYQNIPPHHQFHDFNSSQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENQQLIEKLNHVSENHDQVVQENAKLKEETLELRQMLRDMQIQSPFIPSFSPLEDHINCNSEFLTPDSPNNSISSSMDDLLG 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00293 204 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 85 148 IPR004827 GO:0003700|GO:0006355
Car02g00293 204 SMART brlzneu 83 147 IPR004827 GO:0003700|GO:0006355
Car02g00293 204 Gene3D - 85 140 - -
Car02g00293 204 SUPERFAMILY Leucine zipper domain 87 137 IPR046347 GO:0003700|GO:0006355
Car02g00293 204 PANTHER BZIP TRANSCRIPTION FACTOR 1 191 - -
Car02g00293 204 Coils Coil 124 165 - -
Car02g00293 204 MobiDBLite consensus disorder prediction 184 204 - -
Car02g00293 204 CDD bZIP_plant_GBF1 88 139 IPR045314 GO:0003700|GO:0006355
Car02g00293 204 Pfam bZIP transcription factor 87 144 IPR004827 GO:0003700|GO:0006355
Car02g00293 204 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 191 IPR044521 -
Car02g00293 204 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 90 105 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00293 Car-Chr2 3115638 3116441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00293 60 168 bZIP Transcription Factor Family AT3G30530 73.214 2.58e-49 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car02g00293 bZIP_1 4.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00293 - - aprc:113867865 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00293 02 3115638 3116441 Car02g00293 02 3115638 3116441 ECH
Car02g00293 02 3115638 3116441 Car03g00303 03 6983496 6984327 PCT