Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00292 ATGTCTCGTTATTCCTCTTCTAATCCCTTCGCAACATTTCattccgattctgattccgattccgattctgactcGCCGAGTTACTTCGTCACCGATCTCTTCCAAACTCGCTCCTCCAACCTCCCTTCTCCCTACGATGACACAAACATAAACCCTTTCTCCGACGTCGTTTCTGATCTTCATCAAGGTgaactagaattagaattaggtttaggtttagagttaggatttggtGATGAAAACGAAATTGAAACTCAATATAACGATAACTATGATGAAGTTTTCGATTTTTCGTTGCGTGATGATTCTAGTGGACTTAGGGTTATTGGATTTGGTTCCGATTCAGAATCGAGTGGTCATGATGAAGAATTCGGTTCTGGGAGAATCgatgatgatgaagatgatgaGAGGGTTGGTGGATTGTGTTGGGATAGTCTATGTTTAGAGGATCGTAGGAGTATCAATGAATGGgaggaagtggttgaagagagggtgactgatgatgaaattgaggttgaggttgaagttgaTGATCAATCCGTGGCCTCGGGCTTCgaggaagaagaagaagaaggagGAACGGAACTTGATGAAGAGGGGTTGAGGTATTTGGAATGGGAGATTCTATTGGCTTTTAACAATTTAGAGAGGGGTGTTGGGTTGGAACATGAAGATGAGAACATTGCTGATTTGTATTTAGCTGTTCAAGACGGTATAATATCGGGAACAACCGATTATGATATTCTTTTCGGACAGTTACTTGAGAATGAGAGTGGTTTGAAGGGTAGTCCACCGACGGCGAAGAGTTTTGTGGAGAATCTCCCATTGGTGGAATTGACGGAGGAGGAGTTGAAAGGGAAGGATATTGTGTGTGCTGTTTGTAAAGATGAGGTGATGTTGGAGGAGAAGGTGAGGAAGTTACCTTGCTCACATTGTTACCATGGAGATTGTATTTTGCCATGGTTGAGTATTCGTAACACGTGTCCTGTTTGTCGGTTTGAGTTGCCCACGGATGATGCTGATTACGAGCGGAGTAAGATTCGTAGTGTGGCTCGTGATCTTTGGGAGCTTTCAATGTAA 1080 0.363 MSRYSSSNPFATFHSDSDSDSDSDSPSYFVTDLFQTRSSNLPSPYDDTNINPFSDVVSDLHQGELELELGLGLELGFGDENEIETQYNDNYDEVFDFSLRDDSSGLRVIGFGSDSESSGHDEEFGSGRIDDDEDDERVGGLCWDSLCLEDRRSINEWEEVVEERVTDDEIEVEVEVDDQSVASGFEEEEEEGGTELDEEGLRYLEWEILLAFNNLERGVGLEHEDENIADLYLAVQDGIISGTTDYDILFGQLLENESGLKGSPPTAKSFVENLPLVELTEEELKGKDIVCAVCKDEVMLEEKVRKLPCSHCYHGDCILPWLSIRNTCPVCRFELPTDDADYERSKIRSVARDLWELSM 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00292 359 Pfam Ring finger domain 291 332 IPR001841 -
Car02g00292 359 MobiDBLite consensus disorder prediction 111 131 - -
Car02g00292 359 MobiDBLite consensus disorder prediction 116 131 - -
Car02g00292 359 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 2 358 - -
Car02g00292 359 SMART ring_2 291 331 IPR001841 -
Car02g00292 359 CDD RING-H2_RNF126_like 291 332 - -
Car02g00292 359 MobiDBLite consensus disorder prediction 1 27 - -
Car02g00292 359 ProSiteProfiles Zinc finger RING-type profile. 291 332 IPR001841 -
Car02g00292 359 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 254 338 IPR013083 -
Car02g00292 359 SUPERFAMILY RING/U-box 278 338 - -
Car02g00292 359 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 2 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00292 Car-Chr2 3090773 3091852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00292 206 346 C3H Transcription Factor Family AT3G02340 52.318 1.53e-47 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00292 - - gmx:100812037 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00292 02 3090773 3091852 Car02g00292 02 3090773 3091852 ECH